|
|
| (6 intermediate revisions by the same user not shown) |
| Line 1: |
Line 1: |
| '''MediaWiki has been successfully installed.''' | | <protect> |
| | <h1 class="element-not-collapsible" style="color:#777777; text-align:center;"> |
| | Welcome to the repository of the ''Staphylococcus aureus'' |
| | <br/> |
| | research & annotation community |
| | </h1> |
|
| |
|
| Consult the [//meta.wikimedia.org/wiki/Help:Contents User's Guide] for information on using the wiki software.
| |
|
| |
|
| == Getting started == | | <div style="margin: 0px auto; max-width:910px; color:#F28F1E; font-size:0.7em"> |
| * [//www.mediawiki.org/wiki/Manual:Configuration_settings Configuration settings list] | | * <span style=" color:#444444;">AureoWiki can be searched for locus tags, gene or protein names of ''S. aureus'' COL, N315, NCTC8325, Newman and USA300_FPR3757. Free text search is also possible.</span> |
| * [//www.mediawiki.org/wiki/Manual:FAQ MediaWiki FAQ] | | * <span style=" color:#444444;">A search using locus tags returns the respective gene/protein page. Other search terms will reveal multiple hits listed on a results page.</span> |
| * [https://lists.wikimedia.org/mailman/listinfo/mediawiki-announce MediaWiki release mailing list]
| | * <span style=" color:#444444;">The gene/protein pages contain genome based information complemented by e.g. functional and expression data, enriched by references and origins of the data.</span> |
| * [//www.mediawiki.org/wiki/Localisation#Translation_resources Localise MediaWiki for your language]
| | * <span style=" color:#444444;">Orthologous genes of the five ''S. aureus'' strains are presented side by side making it easy to switch between them by using the register tabs on top.</span> |
| | * <span style=" color:#444444;">Orthologous genes are linked by so called unified "Pangenome" IDs and "Pangenome" gene symbols which can be accessed via the "Pangenome" register tab.</span> |
| | * <span style=" color:#444444;">The "Pangenome" gene pages show the positionally normalized "Pangenome" coordinates and comparative information such as gene descriptions and gene symbols.</span> |
| | * <span style=" color:#444444;">Users can contribute to AureoWiki by adding missing information and new facts about genes or gene products they are interested in. Thus the collective knowledge of the ''S. aureus'' community will become available to all its members.</span> |
| | <br><br> |
| | <span style="font-size:1.1em;color:#444444;"><center> |
| | {| style="margin-left: 1.6em;padding-left: 25px;padding-right: 5px;" |
| | | style="vertical-align:top;" | <b>Please cite: </b> |
| | | [https://www.sciencedirect.com/science/article/pii/S1438422117304629 AureoWiki - The repository of the Staphylococcus aureus research and annotation community.] Fuchs S, Mehlan H, Bernhardt J, Hennig A, Michalik S, Surmann K, Pané-Farré J, Giese A, Weiss S, Backert L, Herbig A, Nieselt K, Hecker M, Völker U, Mäder U. Int J Med Microbiol. 2018 Aug;308(6):558-568. doi: 10.1016/j.ijmm.2017.11.011. Epub 2017 Nov 24. |
| | |- |
| | | |
| | | |
| | |- |
| | | style="vertical-align:top;" | <b>Funding:</b> |
| | | The setup of the Aureowiki was supported by the DFG within the SFBTransRegio34/Z1 |
| | |} |
| | </center></span> |
| | </div> |
| | <div style="display:table-row; height:100%;"> </div> |
| | <small><center>[[Help:Contents|Getting Started]] <span style="margin-left:20px;"></span> [[Downloads]]</center></small> |
| | </protect> |
