PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40
NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus Newman
- locus tag: NWMN_RS02305 [old locus tag: NWMN_0408 ]
- pan locus tag?: SAUPAN002139000
- symbol: NWMN_RS02305
- pan gene symbol?: lpl5
- synonym:
- product: tandem-type lipoprotein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: NWMN_RS02305 [old locus tag: NWMN_0408 ]
- symbol: NWMN_RS02305
- product: tandem-type lipoprotein
- replicon: chromosome
- strand: +
- coordinates: 457321..458112
- length: 792
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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781ATGGAATATCTAAAAAGGCTTGCATTGTTAATAAGTGTTATTATTTTGACCATTTTTATA
ATGGGTTGTGATAGTCAAAGCGATACTGCAGAAAATCCAAAAGAAGGTTCAAAAGAAGCA
CAAATTAAAAAGAGTTTTTCGAAAACGTTAGATATGTATCCAATTAAGAATCTCGAGGAT
TTTTATGACAAAGAAGGATATCGAGATGGCGAATTTAAAAAAGATGATAAAGGTACTTGG
CTAATTAGATCCGAAATAGTTAAACAGCCAAAGGGCAAAGTGATGAAAACAAGAGGTATG
CAATTATATATTAATAGAAATACCGAAACAGCCAAAGGTTTCTTTGTTTTGAAAGAAATA
AGTGAAAATAATAATCGTGTAAATAAAGATAAGGAGGAAAAATACGAAGTGAAAATGGTA
GGAAATAAAATTATTCCTACTGAACAAATTAATGACGAGAAAATAAAAAAAGAAATTGAA
AACTTCAAGTTTTTTGTGCAATATGGAAACTTTAAAAATTTCGAAAAATACAACAATGGT
GAGTTTTCATATAATCCTGAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGAT
GATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAG
TTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAA
TTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATA
CCAAGTAAGTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: NWMN_RS02305 [old locus tag: NWMN_0408 ]
- symbol: NWMN_RS02305
- description: tandem-type lipoprotein
- length: 263
- theoretical pI: 9.1857
- theoretical MW: 30819.8
- GRAVY: -0.862738
⊟Function[edit | edit source]
- TIGRFAM: Staphylococcus tandem lipoproteins (TIGR01742; HMM-score: 343.3)
- TheSEED: data available for COL, N315, USA300_FPR3757
- PFAM: LolA_LolB (CL0048) DUF576; Csa1 family (PF04507; HMM-score: 383.3)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MEYLKRLALLISVIILTIFIMGCDSQSDTAENPKEGSKEAQIKKSFSKTLDMYPIKNLEDFYDKEGYRDGEFKKDDKGTWLIRSEIVKQPKGKVMKTRGMQLYINRNTETAKGFFVLKEISENNNRVNKDKEEKYEVKMVGNKIIPTEQINDEKIKKEIENFKFFVQYGNFKNFEKYNNGEFSYNPEAPIYSAKYQLHNDDYNVRQLRKRYDISTKETPKLLLKGGGDLKNSSVGQNDIEFTFVERKGENIYFNDSVEFIPSK
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator: SaeR see NWMN_0408
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available