NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_RS12390 [old locus tag: SAUSA300_2245 ]
- pan locus tag?: SAUPAN005760000
- symbol: SAUSA300_RS12390
- pan gene symbol?: sarR
- synonym:
- product: transcriptional regulator
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_RS12390 [old locus tag: SAUSA300_2245 ]
- symbol: SAUSA300_RS12390
- product: transcriptional regulator
- replicon: chromosome
- strand: -
- coordinates: 2410700..2411047
- length: 348
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Location: NC_007793 (2410700..2411047) NCBI
- BioCyc: SAUSA300_RS12390 BioCyc
- MicrobesOnline: see SAUSA300_2245
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301ATGAGTAAAATTAATGACATTAATGATTTAGTCAACGCAACATTTCAAGTTAAGAAGTTT
TTCAGAGATACAAAAAAGAAGTTCAATTTGAACTATGAAGAAATTTATATTTTAAATCAT
ATTTTAAGAAGTGAGTCTAACGAAATCTCATCTAAAGAGATTGCTAAGTGCTCAGAGTTC
AAACCTTACTATTTAACTAAAGCTTTACAAAAGCTAAAAGATTTAAAATTGTTATCAAAG
AAAAGAAGTTTACAAGACGAAAGAACAGTTATTGTTTATGTTACAGATACACAAAAAGCA
AATATTCAAAAACTGATTTCAGAATTAGAAGAATACATTAAAAATTAA60
120
180
240
300
348
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_RS12390 [old locus tag: SAUSA300_2245 ]
- symbol: SAUSA300_RS12390
- description: transcriptional regulator
- length: 115
- theoretical pI: 9.86544
- theoretical MW: 13668.7
- GRAVY: -0.623478
⊟Function[edit | edit source]
- ⊞TIGRFAM: Regulatory functions DNA interactions staphylococcal accessory regulator family (TIGR01889; HMM-score: 104.4)and 4 more
- TheSEED: see SAUSA300_2245
- ⊞PFAM: HTH (CL0123) MarR_2; MarR family (PF12802; HMM-score: 30.5)and 7 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
- GI: 445958221 NCBI
- RefSeq: WP_000036076 NCBI
- UniProt: see SAUSA300_2245
⊟Protein sequence[edit | edit source]
- MSKINDINDLVNATFQVKKFFRDTKKKFNLNYEEIYILNHILRSESNEISSKEIAKCSEFKPYYLTKALQKLKDLKLLSKKRSLQDERTVIVYVTDTQKANIQKLISELEEYIKN
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available