Jump to navigation
Jump to search
NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus Newman
- locus tag: NWMN_RS08610 [old locus tag: NWMN_1534 ]
- pan locus tag?: SAUPAN004237000
- symbol: NWMN_RS08610
- pan gene symbol?: lytH
- synonym:
- product: cell wall amidase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: NWMN_RS08610 [old locus tag: NWMN_1534 ]
- symbol: NWMN_RS08610
- product: cell wall amidase
- replicon: chromosome
- strand: -
- coordinates: 1699612..1700487
- length: 876
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361
421
481
541
601
661
721
781
841ATGAAAAAAATAGAGGCATGGTTATCTAAAAAGGGTCTTAAAAATAAACGTACTCTAATA
GTAGTGATTGCCTTTGTCTTATTTATCATCTTTTTATTTTTATTGCTGAATAGCAATAGT
GAAGATAGTGGGAACATCACGATAACTGAAAATGCTGAATTACGTACAGGTCCAAACGCT
GCGTATCCAGTCATATATAAAGTTGAAAAAGGTGACCATTTTAAAAAGATTGGTAAAGTA
GGTAAATGGATTGAAGTTGAAGATACATCCAGTAATGAAAAAGGTTGGATAGCTGGATGG
CACACAAATTTAGATATTGTCGCGGATAATACGAAGGAGAAAAATCCTTTGCAAGGTAAA
ACAATAGTGCTTGATCCTGGTCATGGAGGTAGTGACCAGGGTGCTTCAAGCAATACTAAA
TATAAAAGTTTAGAAAAAGATTATACGTTGAAAACAGCAAAAGAATTGCAGCGTACTTTA
GAAAAAGAAGGCGCAACTGTTAAGATGACAAGAACAGACGATACATATGTTTCACTAGAA
AATCGTGATATCAAAGGCGATGCCTATTTGAGTATACATAATGATGCGTTAGAATCATCT
AATGCAAATGGAATGACAGTTTATTGGTATCATGATAATCAAAGAGCTTTAGCAGATACG
TTAGACGCTACGATTCAGAAGAAAGGTCTACTTTCTAATCGCGGTTCAAGACAAGAAAAT
TATCAAGTGTTAAGACAAACAAAAGTTCCTGCTGTTTTATTAGAATTAGGTTATATTAGT
AACCCAACTGATGAAACGATGATTAAAGATCAATTACATAGACAAATTTTAGAACAAGCA
ATTGTTGATGGCCTTAAAATTTATTTTTCTGCGTAG60
120
180
240
300
360
420
480
540
600
660
720
780
840
876
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: NWMN_RS08610 [old locus tag: NWMN_1534 ]
- symbol: NWMN_RS08610
- description: cell wall amidase
- length: 291
- theoretical pI: 8.61491
- theoretical MW: 32693.9
- GRAVY: -0.505842
⊟Function[edit | edit source]
- reaction: EC 3.5.1.-? ExPASy
- ⊞TIGRFAM: Cell envelope Biosynthesis and degradation of murein sacculus and peptidoglycan N-acetylmuramoyl-L-alanine amidase CwlD (TIGR02883; EC 3.5.1.28; HMM-score: 115.1)Cellular processes Sporulation and germination N-acetylmuramoyl-L-alanine amidase CwlD (TIGR02883; EC 3.5.1.28; HMM-score: 115.1)and 1 more
- TheSEED: data available for COL, N315, NCTC8325, USA300_FPR3757
- ⊞PFAM: Peptidase_MH (CL0035) Amidase_3; N-acetylmuramoyl-L-alanine amidase (PF01520; HMM-score: 152.3)and 5 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MKKIEAWLSKKGLKNKRTLIVVIAFVLFIIFLFLLLNSNSEDSGNITITENAELRTGPNAAYPVIYKVEKGDHFKKIGKVGKWIEVEDTSSNEKGWIAGWHTNLDIVADNTKEKNPLQGKTIVLDPGHGGSDQGASSNTKYKSLEKDYTLKTAKELQRTLEKEGATVKMTRTDDTYVSLENRDIKGDAYLSIHNDALESSNANGMTVYWYHDNQRALADTLDATIQKKGLLSNRGSRQENYQVLRQTKVPAVLLELGYISNPTDETMIKDQLHRQILEQAIVDGLKIYFSA
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available