Jump to navigation
Jump to search
NCBI: 26-AUG-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA0702 [new locus tag: SA_RS03995 ]
- pan locus tag?: SAUPAN002654000
- symbol: llm
- pan gene symbol?: tagO
- synonym:
- product: lipophilic protein affecting lysis rate and methicillin resistance level
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SA0702 [new locus tag: SA_RS03995 ]
- symbol: llm
- product: lipophilic protein affecting lysis rate and methicillin resistance level
- replicon: chromosome
- strand: +
- coordinates: 800380..801435
- length: 1056
- essential: no DEG other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 1123509 NCBI
- RefSeq: NP_373957 NCBI
- BioCyc: see SA_RS03995
- MicrobesOnline: 102983 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021ATGGTTACATTATTACTAGTTGCAGTAACAATGATTGTCAGTTTGACGATAACACCAATT
GTTATTGCAATATCGAAAAGATTAAATTTAGTTGATAAACCAAATTTTAGAAAAGTACAC
ACTAAACCTATTTCAGTTATGGGTGGTACAGTGATTCTCTTTTCATTTTTAATAGGTATT
TGGATTGGTCATCCTATTGAAACAGAAATCAAACCACTTATTATTGGTGCGATTATTATG
TACGTACTTGGGCTTGTAGATGATATCTACGATTTGAAACCGTATATAAAATTGGCTGGT
CAAATTGCCGCTGCCTTAGTAGTTGCTTTTTATGGTGTGACTATTGATTTTATTTCGTTG
CCAATGGGTACAACGATTCATTTTGGATTTCTTAGTATTCCAATTACTGTGATTTGGATT
GTTGCTATTACAAATGCAATTAACTTAATTGATGGACTCGATGGTTTGGCGTCGGGTGTT
TCTGCAATCGGACTCATTACAATAGGATTCATTGCAATTTTACAAGCTAATATTTTCATA
ACGATGATTTGTTGTGTTTTATTAGGCTCTTTAATTGGGTTTTTATTTTACAATTTCCAT
CCTGCCAAAATATTTTTAGGTGATAGTGGGGCTTTAATGATTGGATTTATCATCGGATTC
CTTTCTTTACTCGGATTCAAAAATATTACAATTATTGCATTGTTCTTCCCAATTGTTATC
TTAGCAGTTCCATTCATTGATACTTTGTTCGCAATGATTCGACGTGTGAAAAAAGGGCAG
CATATAATGCAAGCTGATAAATCGCATTTGCATCATAAACTATTAGCTTTAGGCTACACA
CATAGACAAACAGTATTATTAATCTATTCAATCTCTATTTTATTTAGTCTTTCGAGCATT
ATTTTGTATGTATCGCCACCATTAGGTGTTGTATTAATGTTTGTATTAATCATATTTAGT
ATTGAATTAATTGTTGAATTTACAGGATTAATAGATAACAACTACCGACCAATATTAAAT
TTAATTAGTCGGAAATCGTCACACAAAGAAGATTAG60
120
180
240
300
360
420
480
540
600
660
720
780
840
900
960
1020
1056
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA0702 [new locus tag: SA_RS03995 ]
- symbol: Llm
- description: lipophilic protein affecting lysis rate and methicillin resistance level
- length: 351
- theoretical pI: 9.45815
- theoretical MW: 38514.5
- GRAVY: 1.12934
⊟Function[edit | edit source]
- ⊞TIGRFAM: Cell envelope Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase (TIGR02380; EC 2.7.8.33; HMM-score: 152)and 1 more
- TheSEED :
- Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.33)
- ⊞PFAM: no clan defined Glycos_transf_4; Glycosyl transferase family 4 (PF00953; HMM-score: 140.5)and 1 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MVTLLLVAVTMIVSLTITPIVIAISKRLNLVDKPNFRKVHTKPISVMGGTVILFSFLIGIWIGHPIETEIKPLIIGAIIMYVLGLVDDIYDLKPYIKLAGQIAAALVVAFYGVTIDFISLPMGTTIHFGFLSIPITVIWIVAITNAINLIDGLDGLASGVSAIGLITIGFIAILQANIFITMICCVLLGSLIGFLFYNFHPAKIFLGDSGALMIGFIIGFLSLLGFKNITIIALFFPIVILAVPFIDTLFAMIRRVKKGQHIMQADKSHLHHKLLALGYTHRQTVLLIYSISILFSLSSIILYVSPPLGVVLMFVLIIFSIELIVEFTGLIDNNYRPILNLISRKSSHKED
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: no polycistronic organisation predicted
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available