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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus COL
- locus tag: SACOL_RS07520 [old locus tag: SACOL1476 ]
- pan locus tag?: SAUPAN003891000
- symbol: SACOL_RS07520
- pan gene symbol?: —
- synonym:
- product: amino acid permease
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SACOL_RS07520 [old locus tag: SACOL1476 ]
- symbol: SACOL_RS07520
- product: amino acid permease
- replicon: chromosome
- strand: -
- coordinates: 1513309..1514631
- length: 1323
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321ATGTCAAATGGTAAAGAATTACAAAAAAATATAGGTTTCTTCTCAGCGTTTGCTATTGTT
ATGGGGACAGTTATTGGTTCAGGAGTATTCTTTAAAATATCAAACGTAACAGAAGTAACA
GGAACAGCAGGAATGGCCTTGTTTGTATGGTTCCTAGGCGGCATCATTACCATTTGTGCG
GGGTTAACAGCAGCAGAACTTGCTGCTGCAATCCCTGAAACAGGTGGCTTAACGAAGTAT
ATAGAATATACATACGGTGATTTCTGGGGCTTCCTATCAGGTTGGGCGCAATCATTTATT
TATTTTCCAGCTAACGTAGCAGCATTGTCTATCGTATTTGCGACACAGCTAATTAATTTA
TTCCATTTATCTATAGGTTCGTTAATACCAATAGCAATCGCATCTGCGTTATCTATTGTG
TTGATAAATTTCCTAGGTTCAAAAGCAGGCGGAATTTTACAATCAGTTACTTTAGTAATT
AAACTGATTCCAATCATCGTTATTGTAATTTTTGGTATTTTTCAATCTGGAGATATCACT
TTTTCATTAATTCCAACTACAGGTAATTCAGGAAATGGCTTCTTTACAGCAATTGGTAGT
GGTTTATTAGCAACTATGTTTGCATATGATGGTTGGATTCATGTAGGAAATGTTGCGGGG
GAACTTAAAAATCCTAAACGCGATTTACCTTTAGCGATTTCAGTTGGTATCGGTTGTATT
ATGGCTGTGTATTTATTAATTAACGCTACATTCTTATTAACGTTGCCAATAGAACTACTT
GCTGGTAATTTAAATGCAGCTTCAGATACATCAAAAATATTATTTGGTGAAAATGGCGGT
AAGATTATTACAATCGGTATATTAATTTCTGTTTATGGTACGATCAATGGCTATACTATG
ACTGGTATGCGCGTACCATATGCAATGGCTGAAAGAAAATTATTGCCATTTAGCCATTTA
TTCGCAAAATTAACAAAATCTGGCGCACCATGGTTTGGCGCAATTATACAACTTATAATC
GCTATCATCATGATGTCAATGGGAGCATTTGATACAATTACAAATATGTTAATCTTTGTT
ATTTGGTTGTTCTATTGTATGTCATTTGTTGCGGTAATAATTTTAAGAAAACGTGAACCA
AATATGGAACGACCATATAAAGTACCGTTATATCCGATCATACCTTTAATTGCTATTTTG
GCAGGATCATTTGTATTAATTAATACACTGTTTACACAATTTATATTAGCAATCATTGGA
ATTCTAATAACAGCACTTGGTATACCAGTTTATTACTATAAAAAGAAACAAAAAGCATCA
TAA60
120
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1020
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1140
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1260
1320
1323
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SACOL_RS07520 [old locus tag: SACOL1476 ]
- symbol: SACOL_RS07520
- description: amino acid permease
- length: 440
- theoretical pI: 9.55367
- theoretical MW: 47277.2
- GRAVY: 0.929773
⊟Function[edit | edit source]
- ⊞TIGRFAM: Transport and binding proteins Amino acids, peptides and amines L-type amino acid transporter (TIGR00911; HMM-score: 211.1)Transport and binding proteins Amino acids, peptides and amines amino acid transporter (TIGR00909; HMM-score: 170.7)and 10 more
- TheSEED: see SACOL1476
- ⊞PFAM: APC (CL0062) AA_permease_2; Amino acid permease (PF13520; HMM-score: 202.8)and 3 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MSNGKELQKNIGFFSAFAIVMGTVIGSGVFFKISNVTEVTGTAGMALFVWFLGGIITICAGLTAAELAAAIPETGGLTKYIEYTYGDFWGFLSGWAQSFIYFPANVAALSIVFATQLINLFHLSIGSLIPIAIASALSIVLINFLGSKAGGILQSVTLVIKLIPIIVIVIFGIFQSGDITFSLIPTTGNSGNGFFTAIGSGLLATMFAYDGWIHVGNVAGELKNPKRDLPLAISVGIGCIMAVYLLINATFLLTLPIELLAGNLNAASDTSKILFGENGGKIITIGILISVYGTINGYTMTGMRVPYAMAERKLLPFSHLFAKLTKSGAPWFGAIIQLIIAIIMMSMGAFDTITNMLIFVIWLFYCMSFVAVIILRKREPNMERPYKVPLYPIIPLIAILAGSFVLINTLFTQFILAIIGILITALGIPVYYYKKKQKAS
⊟Experimental data[edit | edit source]
- experimentally validated: data available for NCTC8325
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator: CodY see SACOL1476
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available