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NCBI: 03-AUG-2016
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus NCTC8325
- locus tag: SAOUHSC_02188
- pan locus tag?: SAUPAN001657000
- symbol: SAOUHSC_02188
- pan gene symbol?: —
- synonym:
- product: phage head-tail adaptor
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAOUHSC_02188
- symbol: SAOUHSC_02188
- product: phage head-tail adaptor
- replicon: chromosome
- strand: -
- coordinates: 2051146..2051481
- length: 336
- essential: no DEG
⊟Accession numbers[edit | edit source]
- Gene ID: 3919555 NCBI
- RefSeq: YP_500674 NCBI
- BioCyc: G1I0R-2068 BioCyc
- MicrobesOnline: 1290630 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301ATGATGAAATTTAATTCCAATAAATTAAATGAACGTATAGATTTTTGTGAAGATGTAAGC
GAGAGAGTGAACGGAAATCCGATGAAACCGAAGACGAAAATATTATACTCTTGTTTCGCT
TGCATTCAAGAATCTAAAGAATCCGACACTCAAACGAATCTCAATACAGGTAGCAAATTC
ATTAAAACTATTATTATCAGAGATACACGAGGTGATTATAAACCAACAAATAAGCATTAC
GTCTTGCATGAAGGGCAAAGATTTAACATCAAATATGTAAAGCCAGATTATCAAGATAAA
TCTTATTTGCGTATCTATGGCGAGGTGGTCATTTAA60
120
180
240
300
336
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAOUHSC_02188
- symbol: SAOUHSC_02188
- description: phage head-tail adaptor
- length: 111
- theoretical pI: 9.35451
- theoretical MW: 13079.9
- GRAVY: -0.796396
⊟Function[edit | edit source]
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MMKFNSNKLNERIDFCEDVSERVNGNPMKPKTKILYSCFACIQESKESDTQTNLNTGSKFIKTIIIRDTRGDYKPTNKHYVLHEGQRFNIKYVKPDYQDKSYLRIYGEVVI
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: no polycistronic organisation predicted
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: [1] ⊟Multi-gene expression profiles
Click on any data point to display a description of the corresponding condition!
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊞Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊞Other Information[edit | edit source]
⊟Literature[edit | edit source]
⊟References[edit | edit source]
- ↑ Ulrike Mäder, Pierre Nicolas, Maren Depke, Jan Pané-Farré, Michel Debarbouille, Magdalena M van der Kooi-Pol, Cyprien Guérin, Sandra Dérozier, Aurelia Hiron, Hanne Jarmer, Aurélie Leduc, Stephan Michalik, Ewoud Reilman, Marc Schaffer, Frank Schmidt, Philippe Bessières, Philippe Noirot, Michael Hecker, Tarek Msadek, Uwe Völker, Jan Maarten van Dijl
Staphylococcus aureus Transcriptome Architecture: From Laboratory to Infection-Mimicking Conditions.
PLoS Genet: 2016, 12(4);e1005962
[PubMed:27035918] [WorldCat.org] [DOI] (I e)