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NCBI: 10-JUN-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_1850 [new locus tag: SAUSA300_RS10105 ]
- pan locus tag?: SAUPAN004851000
- symbol: SAUSA300_1850
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_1850 [new locus tag: SAUSA300_RS10105 ]
- symbol: SAUSA300_1850
- product: hypothetical protein
- replicon: chromosome
- strand: +
- coordinates: 2012426..2013403
- length: 978
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 3915369 NCBI
- RefSeq: YP_494502 NCBI
- BioCyc: see SAUSA300_RS10105
- MicrobesOnline: 1293365 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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961ATGGACACTGCAACACATATCGCAATTGGGGTGGGCCTTACAGCACTTGCAACTCAAGAT
CCAGCAATGGCTTCTACGTTTGGTGCAACAGCTACAACCCTTATCGTTGGTTCATTAATT
CCTGATGGGGATACTGTTCTTAAATTAAAGGACAATGCAACATATATTTCGCATCATAGA
GGTATCACGCATTCCATCCCTTTCACAATACTATGGCCAATTTTAATTACATTTTTAATA
TTCACGTTCTTTAGTGGAACCAACCCATTTCATGTATGGATGTGGGCTCAGCTCGCAGTA
TTTTTACATGTCTTTGTAGATATATTCAATTCTTATGGTACACAAGCGCTTAGACCTATC
ACAAACAAATGGATTCAATTAAGTGTGATTAACACATTTGACCCTATTATTTTCACAGTT
CTTTGTATTGGTATTGTATTATGGGTTATAGGCTTGCATCCATTTGCAGTCTTCTTTCCT
ATAATCGCTTTACTAATCATTTATTACATGATTCGTTTTAAAATGAGAGCCGTAATTAAG
CAACAAGCTTTAAAAGCAATTCAACAAGAGCATCACCCTGTTAAAGTATTTGTTGCGCCA
ACAATAAAATTTATGGAATGGCGTGTCGCGATACAAACTGATGCACATGACTATGTTGGA
AAAGCATATGGTAGGAATGTGGTGTTTAGTGATAAAGTGGAACGTCAAACATTATCAACA
GACTCCATTTTATGGAAAGTCAAAGGTAATAAAGATATACGTACTTTTTTAAACTTTTCA
TCAATCTATCGTTGGCAAACAACAACGTTAGCAGATGGTTCTACTGAAATTCGTTTGATT
GATTTGCGTTATTTAAAAAATGATCATTATTCATTTGTGGCAATTGCACATGTAACAAAC
GATAATGTCATAGACCACTCTTATATTGGCTGGGTATTTACAGAAGATAAGTTACAACGT
AAACTGTATGCTAAATAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_1850 [new locus tag: SAUSA300_RS10105 ]
- symbol: SAUSA300_1850
- description: hypothetical protein
- length: 325
- theoretical pI: 9.66743
- theoretical MW: 37083
- GRAVY: 0.318462
⊟Function[edit | edit source]
- TIGRFAM: Transport and binding proteins Unknown substrate putative energy coupling factor transporter S component (TIGR04522; HMM-score: 16.1)Biosynthesis of cofactors, prosthetic groups, and carriers Chlorophyll and bacteriochlorphyll geranylgeranyl reductase (TIGR02028; HMM-score: 14)
- TheSEED :
- Uncharacterized membrane protein YfhP
- ⊞PFAM: PhosC-NucP1 (CL0368) YdjM; LexA-binding, inner membrane-associated putative hydrolase (PF04307; HMM-score: 91.2)and 1 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MDTATHIAIGVGLTALATQDPAMASTFGATATTLIVGSLIPDGDTVLKLKDNATYISHHRGITHSIPFTILWPILITFLIFTFFSGTNPFHVWMWAQLAVFLHVFVDIFNSYGTQALRPITNKWIQLSVINTFDPIIFTVLCIGIVLWVIGLHPFAVFFPIIALLIIYYMIRFKMRAVIKQQALKAIQQEHHPVKVFVAPTIKFMEWRVAIQTDAHDYVGKAYGRNVVFSDKVERQTLSTDSILWKVKGNKDIRTFLNFSSIYRWQTTTLADGSTEIRLIDLRYLKNDHYSFVAIAHVTNDNVIDHSYIGWVFTEDKLQRKLYAK
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: no polycistronic organisation predicted
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available