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NCBI: 06-JUL-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus Newman
- locus tag: NWMN_0218 [new locus tag: NWMN_RS01215 ]
- pan locus tag?: SAUPAN001174000
- symbol: NWMN_0218
- pan gene symbol?: —
- synonym:
- product: staphyloxanthin biosynthesis protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: NWMN_0218 [new locus tag: NWMN_RS01215 ]
- symbol: NWMN_0218
- product: staphyloxanthin biosynthesis protein
- replicon: chromosome
- strand: -
- coordinates: 274768..275670
- length: 903
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 5330061 NCBI
- RefSeq: YP_001331252 NCBI
- BioCyc:
- MicrobesOnline: 3705749 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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901ATGGTTATTATGAAGAAAACAATTTTACTGACGATGACAACTCTTACTTTATTTAGTATG
TCGCCTAACTCGGCTCAAGCATATACGAATGATAGCAAAACATTAGAAGAAGCAAAGAAA
GCACACCCAAACGCACAGTTCAAAGTGAATAAAGACACCGGCGCGTATACTTATACATAT
GACAAAAACAACACGCCAAACAACAATCATCAAAACCAGTCACGTACAAACGACAATCAT
CAACACGCAAATCAACGTGATCTTAACAACAATCAGTACCATTCTTCATTAAGTGGTCAG
TATACGCACATTAATGACGCAATTGATTCACACACACCGCCTCAAACGTCACCAAGCAAT
CCTTTGACACCAGCAATACCGAATGTCGAAGACAATGACGATGAATTAAATAACGCTTTT
TCAAAAGATAACAAAGGGCTTATTACAGGCATCGATTTAGACGAATTGTATGACGAATTA
CAAATCGCCGAATTTAATGACAAAGCAAAGACCGCTGACGGTAAACCTTTAGCATTAGGT
AACGGTAAAATCATTGATCAGCCTCTTATCACAAGTAAGAACAACTTATATACTGCTGGA
CAATGTACATGGTATGTCTTTGATAAACGTGCCAAAGATGGACACACGATTAGTACATTT
TGGGGAGATGCTAAAAACTGGGCAGGCCAAGCTTCAAGCAATGGCTTCAAAGTAGATAGA
CACCCAACACGAGGATCAATTTTACAAACAGTAAATGGTCCATTTGGTCATGTAGCCTAC
GTTGAAAAAGTTAATATTGATGGAAGTATTCTAATTTCAGAAATGAACTGGATTGGTGAA
TATATCGTTTCATCAAGAACCATCTCTGCTTCAGAAGTTTCATCATATAATTACATCCAT
TAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: NWMN_0218 [new locus tag: NWMN_RS01215 ]
- symbol: NWMN_0218
- description: staphyloxanthin biosynthesis protein
- length: 300
- theoretical pI: 6.28254
- theoretical MW: 33375.5
- GRAVY: -0.753
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: data available for COL, N315, NCTC8325, USA300_FPR3757
- PFAM: Peptidase_CA (CL0125) CHAP; CHAP domain (PF05257; HMM-score: 47.5)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Extracellular
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 0.09
- Cellwall Score: 0.18
- Extracellular Score: 9.73
- Internal Helices: 0
- LocateP: Secretory(released) (with CS)
- Prediction by SwissProt Classification: Extracellular
- Pathway Prediction: Sec-(SPI)
- Intracellular possibility: -0.17
- Signal peptide possibility: 1
- N-terminally Anchored Score: -2
- Predicted Cleavage Site: NSAQAYTN
- SignalP: Signal peptide SP(Sec/SPI) length 27 aa
- SP(Sec/SPI): 0.995902
- TAT(Tat/SPI): 0.002694
- LIPO(Sec/SPII): 0.001001
- Cleavage Site: CS pos: 27-28. AQA-YT. Pr: 0.9695
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MVIMKKTILLTMTTLTLFSMSPNSAQAYTNDSKTLEEAKKAHPNAQFKVNKDTGAYTYTYDKNNTPNNNHQNQSRTNDNHQHANQRDLNNNQYHSSLSGQYTHINDAIDSHTPPQTSPSNPLTPAIPNVEDNDDELNNAFSKDNKGLITGIDLDELYDELQIAEFNDKAKTADGKPLALGNGKIIDQPLITSKNNLYTAGQCTWYVFDKRAKDGHTISTFWGDAKNWAGQASSNGFKVDRHPTRGSILQTVNGPFGHVAYVEKVNIDGSILISEMNWIGEYIVSSRTISASEVSSYNYIH
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: no polycistronic organisation predicted
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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