PangenomeCOLN315NCTC8325NewmanUSA300_FPR3757JSNZ04-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

NCBI: 06-JUL-2013

⊟Summary

• organism: Staphylococcus aureus Newman
• locus tag: NWMN_0268 [new locus tag: NWMN_RS01490 ]
• pan locus tag^?: SAUPAN000157000
• symbol: NWMN_0268
• pan gene symbol^?: —
• synonym:
• product: phage anti-repressor protein

⊟Additional information (user-provided)

⊟Genome View

⊟Gene

⊟General

• type: CDS
• locus tag: NWMN_0268 [new locus tag: NWMN_RS01490 ]
• symbol: NWMN_0268
• product: phage anti-repressor protein
• replicon: chromosome
• strand: +
• coordinates: 325300..326049
• length: 750
• essential: unknown

⊟Accession numbers

• Gene ID: 5330107 NCBI
• RefSeq: YP_001331302 NCBI
• BioCyc:
• MicrobesOnline: 3705799 MicrobesOnline

⊟Phenotype

⊟Additional information (user-provided)

⊟DNA sequence

• 1
  61
  121
  181
  241
  301
  361
  421
  481
  541
  601
  661
  721
  
  ATGCAAGCATTACAAACAAAATCGAACATCGGAGAAATGTTCAATATTCAAGAAAAAGAA
  AATGGAGAAATCGCAATAAGTGCAAGAGAGTTATATAAAGCTTTGGAAGTTAAAAAGCGT
  TTTAGCGCTTGGGCAGAAATTAACTTGAAGCATTTCAAAGAAAATAGGGATTTTACAAGT
  GTACTTACAAGTACGGTTGTTAATAACGGAGCTGTAAGACAACTAGAAGATTATGCTTTA
  ACACTTGATGTAGCTAAACATGTTGCGATGATGTCAGGTACAGAAAAAGGTTTTGATTTT
  AGAGAGTATTTCATCCAAATTGAAAAAGCATGGAACAGTCCAGAAATGATTATGCAACGT
  GCTTTAAAAATTGCTAACAACACAATCAATCAATTAGAGACAAAGATTGAACGTGATAAA
  CCAAAAATTGTATTTGCAGATGCAGTAGCTACTACTAAGACATCAATTTTAGTTGGAGAG
  TTAGCAAAGATCATTAAACAAAACGGTATAAACATCGGGCAACGCAGATTGTTTGAGTGG
  TTACGTCAAAACGGATTCCTTATTAAACGCAAGGGTGTGGATTATAACATGCCTACACAG
  TATTCAATGGAACGTGAGTTATTCGAAATTAAAGAAACATCAATCACACATTCGGACGGT
  CACACATCAATTAGTAAGACGCCAAAAGTAACAGGTAAAGGACAACAATACTTTGTTAAC
  AAGTTTTTAGGAGAAAAACAAACAACTTAA
  60
  120
  180
  240
  300
  360
  420
  480
  540
  600
  660
  720
  750
  

⊟Protein

⊟General

• locus tag: NWMN_0268 [new locus tag: NWMN_RS01490 ]
• symbol: NWMN_0268
• description: phage anti-repressor protein
• length: 249
• theoretical pI: 9.99274
• theoretical MW: 28563.6
• GRAVY: -0.500402

⊟Function

• TIGRFAM:
  Cellular processes Cellular processes Toxin production and resistance glycosyltransferase, MGT family (TIGR01426; EC 2.4.1.-; HMM-score: 12.4)
• TheSEED  :
  • Phage antirepressor protein
• PFAM:
  no clan defined ANT; Phage antirepressor protein KilAC domain (PF03374; HMM-score: 129.5)
  and 3 more
  AntA; AntA/AntB antirepressor (PF08346; HMM-score: 76.5)
  DUF7307; Pam3 gp33-like protein (PF23984; HMM-score: 13.4)
  DUF3134; Protein of unknown function (DUF3134) (PF11332; HMM-score: 13.3)

⊟Structure, modifications & cofactors

• domains:
• modifications:
• cofactors:
• effectors:

⊟Localization

• PSORTb: Cytoplasmic
  • Cytoplasmic Score: 7.5
  • Cytoplasmic Membrane Score: 1.15
  • Cellwall Score: 0.62
  • Extracellular Score: 0.73
  • Internal Helices: 0
• DeepLocPro: Cytoplasmic
  • Cytoplasmic Score: 0.983
  • Cytoplasmic Membrane Score: 0.0001
  • Cell wall & surface Score: 0.0013
  • Extracellular Score: 0.0157
• LocateP: Intracellular
  • Prediction by SwissProt Classification: Cytoplasmic
  • Pathway Prediction: No pathway
  • Intracellular possibility: 1
  • Signal peptide possibility: -1
  • N-terminally Anchored Score: -1
  • Predicted Cleavage Site: No CleavageSite
• SignalP: no predicted signal peptide
  • SP(Sec/SPI): 0.004699
  • TAT(Tat/SPI): 0.00047
  • LIPO(Sec/SPII): 0.000406
• predicted transmembrane helices (TMHMM): 0

⊟Accession numbers

• GI: 151220480 NCBI
• RefSeq: YP_001331302 NCBI
• UniProt: A0A0H3KAH5 UniProt

⊟Additional information (user-provided)

⊟Protein sequence

• MQALQTKSNIGEMFNIQEKENGEIAISARELYKALEVKKRFSAWAEINLKHFKENRDFTSVLTSTVVNNGAVRQLEDYALTLDVAKHVAMMSGTEKGFDFREYFIQIEKAWNSPEMIMQRALKIANNTINQLETKIERDKPKIVFADAVATTKTSILVGELAKIIKQNGINIGQRRLFEWLRQNGFLIKRKGVDYNMPTQYSMERELFEIKETSITHSDGHTSISKTPKVTGKGQQYFVNKFLGEKQTT

⊟Experimental data

• experimentally validated:
• protein localization:
• quantitative data / protein copy number per cell:
• interaction partners:

⊟Expression & Regulation

⊟Operon

• MicrobesOnline: no polycistronic organisation predicted

⊟Regulation

• regulator:

⊟Additional information (user-provided)

⊟Transcription pattern

• S.aureus Expression Data Browser: no data available

⊟Protein synthesis (provided by Aureolib)

• Aureolib: no data available

⊟Protein stability

• half-life: no data available

⊟Biological Material

⊟Mutants

⊟Expression vector

⊟lacZ fusion

⊟GFP fusion

⊟two-hybrid system

⊟FLAG-tag construct

⊟Antibody

⊟Additional information (user-provided)

⊟Other information (user-provided)

You can add further information about the gene and protein here. [edit]

⊟Literature

⊟References

⊟Relevant publications