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NCBI: 02-MAR-2017

Summary[edit | edit source]

  • organism: Staphylococcus aureus Newman
  • locus tag: NWMN_RS03350 [old locus tag: NWMN_0586 ]
  • pan locus tag?: SAUPAN002481000
  • symbol: NWMN_RS03350
  • pan gene symbol?:
  • synonym:
  • product: hypothetical protein

Genome View[edit | edit source]

Gene[edit | edit source]

General[edit | edit source]

  • type: CDS
  • locus tag: NWMN_RS03350 [old locus tag: NWMN_0586 ]
  • symbol: NWMN_RS03350
  • product: hypothetical protein
  • replicon: chromosome
  • strand: +
  • coordinates: 666942..667658
  • length: 717
  • essential: unknown

Accession numbers[edit | edit source]

  • Location: NC_009641 (666942..667658) NCBI
  • BioCyc:
  • MicrobesOnline:

Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    ATGCGTATTAACGATAAAATTTTACTAGAAAATATAGAAGATTACTTTAATCATAAAGGT
    TTATCACCGCATTTGATTGATGATATTAAAGAGAAAGTAATTACTGATATAAAAAATTCT
    GAAAAGAAAGATCAAGATTATATTGAATATAAAAGAAAATCTCCAGCACAAATCATATTA
    ATGATTCAAAGGAATTTGTTTGCTTTACAAATGAATCCAGTTATTTTCTTTATTATAAAC
    TTCATTCTCATATCCTATTTATATGATAAACAGTATGTTCAGTTTCAAGCTATTACTGGA
    ATGAGTCTATTTTATTGTTTAGTGATTTTTCCAATGACTATTGTTGTATACCTAAGGGTG
    TCTCAAAAGAATTACTTGCGTAGTAATAAAATAGAAATGATTATGGGTACAATTATCGCT
    ATCATATCCTTGTTATTAATTATATTACAAGCATTTAATATTACTTGGGGCGTTATACCA
    ATTACAAATTTTGGACATCAATTTTTCTTTTTCATTGGTATTATTTTAGTAATTGCCGGC
    ATATTTTATAAGCGACTTGAGTTTTCGGGAATCGGGTTATTATTTTGTCAAAAAACCGTC
    GATGCAATGATTCATAATCCACAATCAGCCCAGATTTTTTCATTAATTATATGGATATTA
    TTAGTAGTTCTAGTTATATATTTCACAATTAGATTATCTTCACGTACAAGATTATAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    717

Protein[edit | edit source]

General[edit | edit source]

  • locus tag: NWMN_RS03350 [old locus tag: NWMN_0586 ]
  • symbol: NWMN_RS03350
  • description: hypothetical protein
  • length: 238
  • theoretical pI: 9.70229
  • theoretical MW: 27877.2
  • GRAVY: 0.592857

Function[edit | edit source]

  • TIGRFAM:
    Cell structure Cell envelope Other LPXTG cell wall anchor domain (TIGR01167; HMM-score: 7.3)
    Hypothetical proteins Conserved TIGR00267 family protein (TIGR00267; HMM-score: 6.4)
  • TheSEED:
  • PFAM:

Structure, modifications & interactions[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 5
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.005057
    • TAT(Tat/SPI): 0.000162
    • LIPO(Sec/SPII): 0.001129
  • predicted transmembrane helices (TMHMM): 5

Accession numbers[edit | edit source]

  • GI: 447144877 NCBI
  • RefSeq: WP_001222133 NCBI
  • UniProt:

Protein sequence[edit | edit source]

  • MRINDKILLENIEDYFNHKGLSPHLIDDIKEKVITDIKNSEKKDQDYIEYKRKSPAQIILMIQRNLFALQMNPVIFFIINFILISYLYDKQYVQFQAITGMSLFYCLVIFPMTIVVYLRVSQKNYLRSNKIEMIMGTIIAIISLLLIILQAFNITWGVIPITNFGHQFFFFIGIILVIAGIFYKRLEFSGIGLLFCQKTVDAMIHNPQSAQIFSLIIWILLVVLVIYFTIRLSSRTRL

Experimental data[edit | edit source]

  • experimentally validated: no data available

Expression & Regulation[edit | edit source]

Operon[edit | edit source]

Regulation[edit | edit source]

  • regulator:

Transcription pattern[edit | edit source]

Protein synthesis (provided by Aureolib)[edit | edit source]

Protein stability[edit | edit source]

  • half-life: no data available

Biological Material[edit | edit source]

Mutants[edit | edit source]

Expression vector[edit | edit source]

lacZ fusion[edit | edit source]

GFP fusion[edit | edit source]

two-hybrid system[edit | edit source]

FLAG-tag construct[edit | edit source]

Antibody[edit | edit source]

Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

Literature[edit | edit source]

References[edit | edit source]

Relevant publications[edit | edit source]