Jump to navigation
Jump to search
NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus Newman
- locus tag: NWMN_RS05700 [old locus tag: NWMN_1010 ]
- pan locus tag?: SAUPAN001389000
- symbol: NWMN_RS05700
- pan gene symbol?: yopX
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: NWMN_RS05700 [old locus tag: NWMN_1010 ]
- symbol: NWMN_RS05700
- product: hypothetical protein
- replicon: chromosome
- strand: +
- coordinates: 1112633..1113082
- length: 450
- essential: unknown
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361
421ATGATGCCGAAATATCGAGTGTGGGACGAATATACAGGAAGAATACACGATGTTGTAGGA
TTCGACTTCATTGAGACTGAAGTTCACTATGAAAACTACGCGGAAGCAGAAGCTTTAATA
CATGCAAGAGATTTTAAAGATGTAGAACTTATGCAAAGTACAGGACTTAAAGACAAAAAC
AACAACGAAATATATGCGGGAGATATAGTTGAGTTTGAAGATGAAATATTAGAGATGCCA
GACGATGAATCTGTAATAGGAACAATTAATAGAGCAGTAATATCTATTGATGTTGTAAAT
GGTATTCAATTAAAAGATTTTATGTTTGAGGGCGCAGTCTCCGAAAATGATTACTTTGAG
TATATAGACATAAAATCCTTCCTTAGATATGACTGTGAGGTTAAAGGCAACATATTTGAA
TCATCACATTTATTGGAGGTAACAGAATGA60
120
180
240
300
360
420
450
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: NWMN_RS05700 [old locus tag: NWMN_1010 ]
- symbol: NWMN_RS05700
- description: hypothetical protein
- length: 149
- theoretical pI: 3.95374
- theoretical MW: 17339.2
- GRAVY: -0.32953
⊟Function[edit | edit source]
- TIGRFAM: Hypothetical proteins Conserved phage conserved hypothetical protein TIGR01671 (TIGR01671; HMM-score: 57.3)Mobile and extrachromosomal element functions Prophage functions phage conserved hypothetical protein TIGR01671 (TIGR01671; HMM-score: 57.3)
- TheSEED:
- ⊞PFAM: no clan defined YopX; YopX protein (PF09643; HMM-score: 68)and 1 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MMPKYRVWDEYTGRIHDVVGFDFIETEVHYENYAEAEALIHARDFKDVELMQSTGLKDKNNNEIYAGDIVEFEDEILEMPDDESVIGTINRAVISIDVVNGIQLKDFMFEGAVSENDYFEYIDIKSFLRYDCEVKGNIFESSHLLEVTE
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available