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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus Newman
- locus tag: NWMN_RS05800 [old locus tag: NWMN_1024 ]
- pan locus tag?: SAUPAN001691000
- symbol: NWMN_RS05800
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Additional information (user-provided)[edit | edit source]
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: NWMN_RS05800 [old locus tag: NWMN_1024 ]
- symbol: NWMN_RS05800
- product: hypothetical protein
- replicon: chromosome
- strand: +
- coordinates: 1123029..1123412
- length: 384
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
⊟Additional information (user-provided)[edit | edit source]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361ATGACACCGAACTTACAACTTTATAATAAAGCGTATGAAACGCTACAAGGATATGGATTC
CCTGTTATTTCTCGTAAAGAGATGCAACAAGAGATTCCGTATCCTTTTTTTGTAATAAAA
ATGCCGGAGTCAAATAGAAGTAAGTACACGTTTGATAGTTATTCTGGCGATACGAATTTA
GTTATTGATATTTGGAGTGTAAGCGATGATTTAGGACATCATGACGGACTTGTTAAAAGG
TGTATCGATGATTTAACACCTAGCGTTAAAACAAACGATTATGACTTTGAAGAAGATGAT
ACTAACATCGCACAGTTAGTCGATGATACTACTAATCAAGAATTGCTACACACATCAGTA
ACGATATCTTACAAAACATTTTAA60
120
180
240
300
360
384
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: NWMN_RS05800 [old locus tag: NWMN_1024 ]
- symbol: NWMN_RS05800
- description: hypothetical protein
- length: 127
- theoretical pI: 4.19639
- theoretical MW: 14673.2
- GRAVY: -0.570866
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: see NWMN_1024
- PFAM:
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 7.5
- Cytoplasmic Membrane Score: 1.15
- Cellwall Score: 0.62
- Extracellular Score: 0.73
- Internal Helices: 0
- DeepLocPro: Cytoplasmic
- Cytoplasmic Score: 0.7227
- Cytoplasmic Membrane Score: 0.0563
- Cell wall & surface Score: 0.0015
- Extracellular Score: 0.2195
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.00448
- TAT(Tat/SPI): 0.000293
- LIPO(Sec/SPII): 0.00081
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Additional information (user-provided)[edit | edit source]
⊟Protein sequence[edit | edit source]
- MTPNLQLYNKAYETLQGYGFPVISRKEMQQEIPYPFFVIKMPESNRSKYTFDSYSGDTNLVIDIWSVSDDLGHHDGLVKRCIDDLTPSVKTNDYDFEEDDTNIAQLVDDTTNQELLHTSVTISYKTF
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Additional information (user-provided)[edit | edit source]
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Additional information (user-provided)[edit | edit source]
⊟Other information (user-provided)[edit | edit source]
You can add further information about the gene and protein here. [edit]
⊟Literature[edit | edit source]
⊟References[edit | edit source]