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NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus Newman
  • locus tag: NWMN_RS09370 [old locus tag: NWMN_1669 ]
  • pan locus tag?: SAUPAN004473000
  • symbol: NWMN_RS09370
  • pan gene symbol?: comK2
  • synonym:
  • product: competence protein ComK

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: NWMN_RS09370 [old locus tag: NWMN_1669 ]
  • symbol: NWMN_RS09370
  • product: competence protein ComK
  • replicon: chromosome
  • strand: +
  • coordinates: 1865757..1866200
  • length: 444
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

  • Location: NC_009641 (1865757..1866200) NCBI
  • BioCyc:
  • MicrobesOnline: see NWMN_1669

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    TTGCAAGACAATTCTACTAAATATCTACTTTATATCCAAACTGCTACTTCAAACCATCTC
    GAAACAAATTGTGTCTTTTTACATTGCGATTACATTCTTAAAGTTCCAATTAACAAACTC
    GTTTCATATTATGCGAAATTGCATTTATCATCACAAAGTGTGCTAATTGAGACTGCAAAA
    AACATACTAAATATTAATAAACTGGTTCCTATTTACATCAACCCAAAAACTATACTTTTT
    CCGTTAAAACATAAACGTGCACCGATACAAATTTATATCAATGCACATTATATTGTTGGT
    ATGACTGCCATAGAGAATTCAACATTAATACATTTTCAAGAAGGCATTCAGCTAGAAGTT
    GATGAGCCATTTTCTCTAGTTTCAAAAAAATGTCATGAAAGTTTAGCTTTGAAGCACTTC
    ATTGAAAATACTATTTCGAATTAA
    60
    120
    180
    240
    300
    360
    420
    444

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: NWMN_RS09370 [old locus tag: NWMN_1669 ]
  • symbol: NWMN_RS09370
  • description: competence protein ComK
  • length: 147
  • theoretical pI: 8.46073
  • theoretical MW: 16867.6
  • GRAVY: 0.044898

⊟Function[edit | edit source]

  • TIGRFAM:
  • TheSEED: data available for COL, N315, NCTC8325
  • PFAM:
    PLP_aminotran (CL0061) ComK; ComK protein (PF06338; HMM-score: 40.1)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0.32
    • Cytoplasmic Membrane Score: 9.55
    • Cellwall Score: 0.12
    • Extracellular Score: 0.01
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.00687
    • TAT(Tat/SPI): 0.000151
    • LIPO(Sec/SPII): 0.005321
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MQDNSTKYLLYIQTATSNHLETNCVFLHCDYILKVPINKLVSYYAKLHLSSQSVLIETAKNILNINKLVPIYINPKTILFPLKHKRAPIQIYINAHYIVGMTAIENSTLIHFQEGIQLEVDEPFSLVSKKCHESLALKHFIENTISN

⊟Experimental data[edit | edit source]

  • experimentally validated:
  • protein localization:
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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