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COLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40
NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus Newman
- locus tag: NWMN_RS10495
- pan locus tag?:
- symbol: NWMN_RS10495
- pan gene symbol?: —
- synonym:
- product: membrane protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: NWMN_RS10495
- symbol: NWMN_RS10495
- product: membrane protein
- replicon: chromosome
- strand: +
- coordinates: 2033470..2034456
- length: 987
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NC_009641 (2033470..2034456) NCBI
- BioCyc:
- MicrobesOnline:
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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961ATGAACGATCAATGGTATAAACATTTAATTGGTGCCAGAACAATTAAAACTGGTATTGCC
ATTTTTTTAACAGCTGTCTTTTGTATGGCACTAGATTTAACACCCATCTATGCCATTTTA
ACAGCTGTAGTCACAATTGAACCAACTGCCAAGGCATCACTTATTAAAGGTTATCGTAGA
TTACCTGCTACGGTAATTGGTGCAGGCTTTGCAGTATTATTTACATATTTATTCGGCGAT
CAATCACCTTTTACATATGCATTGAGTGCAACGTTCACGATTTTATTCTGTACAAAACTC
AAATTGCAAGTTGGTACGAATGTCGCTGTACTAACATCATTAGCTATGATTCCAGGTATT
CATGATGCCTACATATTCAACTTTTTGTCTCGAACATTGACAGCAATTATTGGACTCGTG
ACATCAGGTTTAATTAACTTCATGGTGTTTCCACCTAAGTATTATGGTCAGGTCGAAGAA
AAATTAAGTAAGACAGATGCCTTGATGTATAAATTATTTTACAATCGCTGCCAAGAACTT
ATCTTATCAAGACTGCAATCTGATAAAAGCGAAAAAGCATATAAAAATATTTTCAATTTA
AATAATCAAGTTGAAACGTTAATAAGTTATCAACGTGATGAATTAAGCTATCATAAGAAA
AAAGAATGTGATTGGAAATTACTCAATCAATTAACTAAACGTGCATATACGAATCGTTTG
TTTATCACTCATTTATCAAATATCATTTACTTGCCTAAAAATACTCGTGTTAACTTTTCA
GGTGACGAAAAAATGGCATTGCTAAAAATTAGTAGTAGCATCAAAGATATATTTTATGAT
GGTTCTTTTAAGAGAGAAGATGATTCTGTAGAAACTTTACGTTCGACTATAAAAGCACTT
GAAATTAGTGGTGAAAATCAAATTAAAAGTCATATACTATACGAAGTTCTAATGATTTAT
CGACTGCTAGACAGCAGATATGCTTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: NWMN_RS10495
- symbol: NWMN_RS10495
- description: membrane protein
- length: 328
- theoretical pI: 9.62632
- theoretical MW: 37435.5
- GRAVY: 0.0890244
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED:
- PFAM: FUSC (CL0307) ArAE_1; Aromatic acid exporter family member 1 (PF06081; HMM-score: 100.7)and 3 moreFUSC; Fusaric acid resistance protein family (PF04632; HMM-score: 49.4)ALMT; Aluminium activated malate transporter (PF11744; HMM-score: 31.6)FUSC_2; Fusaric acid resistance protein-like (PF13515; HMM-score: 26)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 10
- Cellwall Score: 0
- Extracellular Score: 0
- Internal Helices: 4
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.250051
- TAT(Tat/SPI): 0.005715
- LIPO(Sec/SPII): 0.025466
- predicted transmembrane helices (TMHMM): 4
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MNDQWYKHLIGARTIKTGIAIFLTAVFCMALDLTPIYAILTAVVTIEPTAKASLIKGYRRLPATVIGAGFAVLFTYLFGDQSPFTYALSATFTILFCTKLKLQVGTNVAVLTSLAMIPGIHDAYIFNFLSRTLTAIIGLVTSGLINFMVFPPKYYGQVEEKLSKTDALMYKLFYNRCQELILSRLQSDKSEKAYKNIFNLNNQVETLISYQRDELSYHKKKECDWKLLNQLTKRAYTNRLFITHLSNIIYLPKNTRVNFSGDEKMALLKISSSIKDIFYDGSFKREDDSVETLRSTIKALEISGENQIKSHILYEVLMIYRLLDSRYA
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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