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COLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40
NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus Newman
- locus tag: NWMN_RS11165
- pan locus tag?:
- symbol: NWMN_RS11165
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: NWMN_RS11165
- symbol: NWMN_RS11165
- product: hypothetical protein
- replicon: chromosome
- strand: -
- coordinates: 2143493..2143705
- length: 213
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NC_009641 (2143493..2143705) NCBI
- BioCyc:
- MicrobesOnline:
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181ATGACAGACGATAATGTCAATGATCATATTATAAAGAATCACATAGAAATGATTGTTGAC
AGATTAGCGACCGATAAAGAGTTTTATATTTTTGACTCCCTTATACAAGGACTTAGTTAT
CAAGATATTAGTAGTGCCTTAGATTGTTCAGAACAATCTGTAATATTATGGTATGAAACC
ATATTAGATAAAATTGTGGGGGTGATAAAATGA60
120
180
213
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: NWMN_RS11165
- symbol: NWMN_RS11165
- description: hypothetical protein
- length: 70
- theoretical pI: 4.06289
- theoretical MW: 8077.13
- GRAVY: 0.0471429
⊟Function[edit | edit source]
- ⊞TIGRFAM: RNA polymerase sigma factor, sigma-70 family (TIGR02937; HMM-score: 19)RNA polymerase sigma-70 factor, Bacteroides expansion family 1 (TIGR02985; HMM-score: 15.4)and 4 more
- TheSEED:
- ⊞PFAM: HTH (CL0123) GerE; Bacterial regulatory proteins, luxR family (PF00196; HMM-score: 22.4)Sigma70_r4_2; Sigma-70, region 4 (PF08281; HMM-score: 18.6)and 1 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MTDDNVNDHIIKNHIEMIVDRLATDKEFYIFDSLIQGLSYQDISSALDCSEQSVILWYETILDKIVGVIK
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available