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COLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40
NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus Newman
- locus tag: NWMN_RS12800
- pan locus tag?:
- symbol: NWMN_RS12800
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: NWMN_RS12800
- symbol: NWMN_RS12800
- product: hypothetical protein
- replicon: chromosome
- strand: +
- coordinates: 2441495..2441680
- length: 186
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NC_009641 (2441495..2441680) NCBI
- BioCyc:
- MicrobesOnline:
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181ATGACAACAGCATTAATTGGTGTAATTGTATTAATCTTACTAATTATTAGCTTTGTGCCA
AACTACCGTGCTATGAAATCAGCAAAAGAACAAGGAAGTAATGCAACAAGAGCTACAATT
ATGGTAGGCATAGATATTATCTTAATTGTACTTATCATCGTGACGTTATTATTAAAATAT
ATGTAA60
120
180
186
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: NWMN_RS12800
- symbol: NWMN_RS12800
- description: hypothetical protein
- length: 61
- theoretical pI: 10.3246
- theoretical MW: 6675.29
- GRAVY: 1.36557
⊟Function[edit | edit source]
- TIGRFAM: variant surface antigen, rifin family (TIGR01477; HMM-score: 5.9)
- TheSEED:
- ⊞PFAM: no clan defined DUF3149; Protein of unknown function (DUF3149) (PF11346; HMM-score: 11.3)Omega_toxin (CL0083) Chi-conotoxin; chi-Conotoxin or t superfamily (PF16981; HMM-score: 10.3)no clan defined P12; Virus attachment protein p12 family (PF12669; HMM-score: 9.6)OppC_N; N-terminal TM domain of oligopeptide transport permease C (PF12911; HMM-score: 9.2)and 3 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MTTALIGVIVLILLIISFVPNYRAMKSAKEQGSNATRATIMVGIDIILIVLIIVTLLLKYM
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available