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COLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40


Summary[edit | edit source]

  • organism: Staphylococcus aureus NCTC8325
  • locus tag: S1172 [1]
  • symbol: S1172
  • synonym:
  • product: RNA feature, intergenic transcript, antisense RNA

Genome View[edit | edit source]

Gene[edit | edit source]

General[edit | edit source]

  • type: misc_RNA
  • locus tag: S1172 [1]
  • symbol: S1172
  • product: RNA feature, intergenic transcript, antisense RNA
  • replicon: chromosome
  • strand: -
  • coordinates: 2767982..2769561
  • length: 1580
  • essential: unknown

Accession numbers[edit | edit source]

  • SRD:

Phenotype[edit | edit source]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    TAAAACACATGCTATAGCGGTATACCGTTTATGAATTGAATCAAAAGTACACAGGTGCTA
    AAGTATGTGCTTCTAAAATGAAGACTATTTTTTATTACAAGAAAATGTATCTAGTAAACT
    TAAAGTAGCAAGACCTAATAAATTTAATGCATGTTGTGCACCTTTTTTACCTTGGCCAGC
    TTCGAAATGTTTGTAAGCAGCTACACTTAAAATGCCTATCGTTGATAGTGATGCAAGGCG
    AGAAATGTTTTTATTGATAAAGCTAGCTGAGTATAAAGCAGCAGTAGTTGCTTCTGCAAT
    GCCGACGTATTTTACAAGTTCTTTTTGCAAGCCAAAAGTATGTTCAAACAGTTCAATCAT
    ACCCTTATCTTCTTGCAATTTAGGTTTACTGGCTTGGTATAGCTCTTTCGCAAGTTTTAA
    ATTCGTTGCGTAACGCAAAATCATATTTAATTCCTCCCAATATTTGATTTTTTGTGAAAG
    ATGATTACTTTATCATTTTTACCCGTTTCTATAAAAATGAATCAATTATGTAACGTATGT
    GTAGTTTAGGAATGTTTGCTATGGAAATATAATTCTGTTCACTCAAAATGTATGAAATTA
    ATGTGTAGTTTTGTCGAGTTGCTCTTTTAATTTGGTTAGATTGTTTTTTAGAGAAGCGGT
    ACTATTTTTAAGTGCATCAACAGATTTACCTTCGTTTTGAGACATTGAGTTTATTACAGC
    ACGAAGTTCTGTTTCTAGTATGTCAGCGTCGCCTTTAGCATTAGAACTTAATACTTTAAT
    ATCTCTTAAAAGGCTATCTGATAGTAGTGCATTTTTGCCAGTCTCCAATTTCGAATTGTA
    ATTCCAACCGCTACTTAACTCAATAGCATCTAAATCGGTTATATGATCATTTGTTCTCAT
    CATACTTTCCTCCCTCGATGGAAATTACATTAGTATCCGATTTTAAACGGCCATTTCCAT
    CTACCATTGACGGGGAAACATCATCTTTATAAAACTGTACAAATTTTGTGCTAGGATATG
    ATTGCATAATGTCATTTATAGATTTTTGAAGGTTCCAAGCATAGTTTTTTACTGTTTCTC
    TATTTTTTTCTTTATCATAATAAGCAATGAACTCTGATTTCATATTTTTTTGTATTTGTG
    GATATTTGTTAATCAAAGATTGTAACTGTTGATTGAATGCATCACCTTTTAAGTGCATAA
    CAGGTTTGAATTCTTTTTTGAACTTATCCAGATCATCGATACTATCTGTTCTGAAATTCA
    AGTATTGCCTTGTAACGCCGTTAAATTCTTGTTTTACTTGAAGTTTTTCGCTCATCGCAT
    AATAGCTGTCTTTTTCAATTTCACTTTATTATTATAAACTAATCATGATTGAAGTAACTA
    TAATTAATTAAATTTACAAAAGATATCATAAATATTAATTGTATAAATCCTTATCTGAAT
    TTTTCGAATCAAGAACGCAAATTATAAGCAACCACGTCATATATAGTTTCTACTTATAAA
    TAAATTGTTTATTTATATTAGACGCTTATGTAAAGAGGGCGTAACCTTAAATGTAATTAC
    TTATAAGGGGTGAAGATAGT
    60
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    840
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    1320
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    1560
    1580

Expression & Regulation[edit | edit source]

Operon[edit | edit source]

Regulation[edit | edit source]

  • regulator:

Transcription pattern[edit | edit source]


Biological Material[edit | edit source]

Mutants[edit | edit source]

Expression vector[edit | edit source]

lacZ fusion[edit | edit source]

GFP fusion[edit | edit source]

two-hybrid system[edit | edit source]

FLAG-tag construct[edit | edit source]

Antibody[edit | edit source]

Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

Literature[edit | edit source]

References[edit | edit source]

  1. 1.0 1.1 1.2 1.3 Ulrike Mäder, Pierre Nicolas, Maren Depke, Jan Pané-Farré, Michel Debarbouille, Magdalena M van der Kooi-Pol, Cyprien Guérin, Sandra Dérozier, Aurelia Hiron, Hanne Jarmer, Aurélie Leduc, Stephan Michalik, Ewoud Reilman, Marc Schaffer, Frank Schmidt, Philippe Bessières, Philippe Noirot, Michael Hecker, Tarek Msadek, Uwe Völker, Jan Maarten van Dijl
    Staphylococcus aureus Transcriptome Architecture: From Laboratory to Infection-Mimicking Conditions.
    PLoS Genet: 2016, 12(4);e1005962
    [PubMed:27035918] [WorldCat.org] [DOI] (I e)

Relevant publications[edit | edit source]