PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

NCBI: 26-AUG-2013

⊟Summary

• organism: Staphylococcus aureus N315
• locus tag: SA0031
• pan locus tag^?: SAUPAN000090000
• symbol: SA0031
• pan gene symbol^?: —
• synonym:
• product: hypothetical protein

⊟Gene

⊟General

• type: CDS
• locus tag: SA0031
• symbol: SA0031
• product: hypothetical protein
• replicon: chromosome
• strand: +
• coordinates: 39987..40178
• length: 192
• essential: no DEG

⊟Accession numbers

• Gene ID: 1122805 NCBI
• RefSeq: NP_373271 NCBI
• BioCyc:
• MicrobesOnline: 102297 MicrobesOnline

⊟Phenotype

Share your knowledge and add information here. [edit]

⊟DNA sequence

• 1
  61
  121
  181
  
  ATCTCCACCTTTAAACCCTTGCCAATTTTTATTTTGTCCGTTTTGTCTAGCTTACCGAAA
  GCCAGACTCAGCAAGAATAAAATTTTTATTGTCTTTCGGTTTTCTAGTGTAACGGACAAA
  ACCACTCAAAATAAAAAAGATACAAGAGAGGTCTCTCGTATCTTTTATTCAGCAATCGCG
  CCCGATTGCTGA
  60
  120
  180
  192
  

⊟Protein

⊟General

• locus tag: SA0031
• symbol: SA0031
• description: hypothetical protein
• length: 63
• theoretical pI: 10.9327
• theoretical MW: 7183.44
• GRAVY: 0.0190476

⊟Function

• TIGRFAM:
• TheSEED:
• PFAM:

⊟Structure, modifications & cofactors

• domains:
• modifications:
• cofactors:
• effectors:

⊟Localization

• PSORTb: unknown (no significant prediction)
  • Cytoplasmic Score: 2.5
  • Cytoplasmic Membrane Score: 2.5
  • Cellwall Score: 2.5
  • Extracellular Score: 2.5
  • Internal Helices: 0
• LocateP: N-terminally anchored (No CS)
  • Prediction by SwissProt Classification: Membrane
  • Pathway Prediction: Sec-(SPI)
  • Intracellular possibility: 0.5
  • Signal peptide possibility: 0
  • N-terminally Anchored Score: 4
  • Predicted Cleavage Site: No CleavageSite
• SignalP: no predicted signal peptide
  • SP(Sec/SPI): 0.333095
  • TAT(Tat/SPI): 0.021522
  • LIPO(Sec/SPII): 0.088305
• predicted transmembrane helices (TMHMM): 0

⊟Accession numbers

• GI: 15925738 NCBI
• RefSeq: NP_373271 NCBI
• UniProt: A0A0H3JKQ9 UniProt

⊟Protein sequence

• MSTFKPLPIFILSVLSSLPKARLSKNKIFIVFRFSSVTDKTTQNKKDTREVSRIFYSAIAPDC

⊟Experimental data

• experimentally validated:
• protein localization:
• quantitative data / protein copy number per cell:
• interaction partners:

⊟Expression & Regulation

⊟Operon

• SA0031 no polycistronic organisation predicted

⊟Regulation

• regulator:

⊟Transcription pattern

• S.aureus Expression Data Browser: no data available

⊟Protein synthesis (provided by Aureolib)

• Aureolib: no data available

⊟Protein stability

• half-life: no data available

⊟Other Information

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