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NCBI: 26-AUG-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA0064
- pan locus tag?: SAUPAN000451000
- symbol: SA0064
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SA0064
- symbol: SA0064
- product: hypothetical protein
- replicon: chromosome
- strand: -
- coordinates: 71036..71350
- length: 315
- essential: no DEG
⊟Accession numbers[edit | edit source]
- Gene ID: 1122838 NCBI
- RefSeq: NP_373304 NCBI
- BioCyc:
- MicrobesOnline: 2137104 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
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241
301ATGAAAAGAGTTTCTTATTCAGTAGAAACAAAGTATAAAGCAGTTGAAATGAAAGCAGCA
GGATTTTCAACAAAAGAAATTATGAAAGAATTAAATATTAAAAATAGAACACAAGTGGAA
ACTTGGTGGCGATGGTATCGAAATGGGGAAAGTTATAGATTTTCACAACACGTTGGTAAA
CAATATACCTACGGTAAAGGATTAGAAGAGCTGTCAGAAGTAGAACAATTAAAATTAGAA
AATAAGAGAAAAGATATAGAATTGGATATTTTAAAAAAGTACAAGGCATTGGAAAGGAAG
TGGTACCAACAGTAG60
120
180
240
300
315
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA0064
- symbol: SA0064
- description: hypothetical protein
- length: 104
- theoretical pI: 10.1342
- theoretical MW: 12721.5
- GRAVY: -1.12308
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED :
- Transposase
- PFAM: HTH (CL0123) HTH_28; Helix-turn-helix domain (PF13518; HMM-score: 30.7)and 3 moreHTH_23; Homeodomain-like domain (PF13384; HMM-score: 21.1)GerE; Bacterial regulatory proteins, luxR family (PF00196; HMM-score: 16.5)Terminase_5; Putative ATPase subunit of terminase (gpP-like) (PF06056; HMM-score: 15.9)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Extracellular
- Cytoplasmic Score: 0.24
- Cytoplasmic Membrane Score: 0.05
- Cellwall Score: 0.8
- Extracellular Score: 8.91
- Internal Helices: 0
- LocateP: Intracellular
- Prediction by SwissProt Classification: Cytoplasmic
- Pathway Prediction: No pathway
- Intracellular possibility: 1
- Signal peptide possibility: -1
- N-terminally Anchored Score: 1
- Predicted Cleavage Site: No CleavageSite
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.015793
- TAT(Tat/SPI): 0.001502
- LIPO(Sec/SPII): 0.001829
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MKRVSYSVETKYKAVEMKAAGFSTKEIMKELNIKNRTQVETWWRWYRNGESYRFSQHVGKQYTYGKGLEELSEVEQLKLENKRKDIELDILKKYKALERKWYQQ
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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