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NCBI: 26-AUG-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA0190 [new locus tag: SA_RS01130 ]
- pan locus tag?: SAUPAN001041000
- symbol: SA0190
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SA0190 [new locus tag: SA_RS01130 ]
- symbol: SA0190
- product: hypothetical protein
- replicon: chromosome
- strand: -
- coordinates: 225363..225962
- length: 600
- essential: no DEG
⊟Accession numbers[edit | edit source]
- Gene ID: 1122966 NCBI
- RefSeq: NP_373433 NCBI
- BioCyc: see SA_RS01130
- MicrobesOnline: 102459 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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541ATGTCATTATCAAAACTACCTTTGTTTAATCACTTTGCAAATATCCGCATTCAACCAAAG
TTAATCATTAAGCTGTTTCTGACTTTGATAATAATTGTTACATATACATTTGTTAGTGGA
CTATCTGTGGACTATAAAAAGTTATTGAGTGAAGCAGGACTCTCAGAGACATCATTAGCA
CAAATAAAAATTTTTAGTCAAATTAGTATTTTTTTCTCAAGAGTTTTCAGCGTATTATTT
ACATTTTTAATCATTCTAGTTATCTCTAGAATTATGCGCTCAGATGCTAATACAAAATCT
ATATTCTCTGCAACGTTAAGCTACATACTGTTTACAAATGCTATTAGTTTAATTATACTT
ACCATCCAAATAAGTGCCGGTTTATCATTAATTGACTATTCTATTACTAGTTTAAATATT
TTTGCTAAAGGAAATCGCATTCTGGGTACTTTCGACTTACAATTTTTTGTACAAGCATAC
ATACTTACAGTCATGCTAATTGGTACGTCGAAACTTTCTATACGAGCATCCACTATTTGG
GGTATTATATATCTTATTTTAATTATCACTTTTTCTTTGATTAGTATTAGCATTCAGTGA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA0190 [new locus tag: SA_RS01130 ]
- symbol: SA0190
- description: hypothetical protein
- length: 199
- theoretical pI: 10.5863
- theoretical MW: 22266.6
- GRAVY: 1.06181
⊟Function[edit | edit source]
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 10
- Cellwall Score: 0
- Extracellular Score: 0
- Internal Helices: 5
- LocateP: Multi-transmembrane
- Prediction by SwissProt Classification: Membrane
- Pathway Prediction: Sec-(SPI)
- Intracellular possibility: 0.17
- Signal peptide possibility: -1
- N-terminally Anchored Score: 1
- Predicted Cleavage Site: No CleavageSite
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.044467
- TAT(Tat/SPI): 0.000337
- LIPO(Sec/SPII): 0.007655
- predicted transmembrane helices (TMHMM): 5
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MSLSKLPLFNHFANIRIQPKLIIKLFLTLIIIVTYTFVSGLSVDYKKLLSEAGLSETSLAQIKIFSQISIFFSRVFSVLFTFLIILVISRIMRSDANTKSIFSATLSYILFTNAISLIILTIQISAGLSLIDYSITSLNIFAKGNRILGTFDLQFFVQAYILTVMLIGTSKLSIRASTIWGIIYLILIITFSLISISIQ
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: no polycistronic organisation predicted
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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