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NCBI: 26-AUG-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA0330 [new locus tag: SA_RS01895 ]
- pan locus tag?: SAUPAN001881000
- symbol: SA0330
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SA0330 [new locus tag: SA_RS01895 ]
- symbol: SA0330
- product: hypothetical protein
- replicon: chromosome
- strand: +
- coordinates: 388152..388697
- length: 546
- essential: no DEG other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 1123109 NCBI
- RefSeq: NP_373576 NCBI
- BioCyc: see SA_RS01895
- MicrobesOnline: 102602 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
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121
181
241
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361
421
481
541ATGTTTGGAATGAAAGTGAATGAACAAATAACATTAAAAATTTTAGAAGCTCATGACACA
GAAGCGCTTTTCAATTTAGTCAATCGTTCAAGAAATTCACTTAGGGAATGGTTACCTTGG
GTAGATGCAACTGAGCAACCATCAGATACGCGTGCATTTATTAAAAGAGGACTTTTGCAA
TTTGCTGATGGTAATGGATTTCAGTGTGGCATTTGGTATGAAGGAACGCTAGTTGGTGTC
ATCGGTTTACATGAAATTAATCACATGCACAGAAAAACTTCATTAGGGTACTATTTAGAT
AAACAATTTGAGGGTCATGGGATTATGACACAAGCAGTTGAGGCATTGATAAAGTATTGT
TTCGAAGAGCTTGACTTAAACCGAATTGAGATTAGTGCCGCAGTTAATAATGAAAAAAGC
CGAGCTATTCCTGAAAGGCTGGGATTTACTAGAGAAGGTATGTTACGTGACAATGAATTA
CTAAATGGTATTTATTCATCGAGTTACATCTATAGTTTATTAAAATCAGAATACGACCAA
AAATGA60
120
180
240
300
360
420
480
540
546
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA0330 [new locus tag: SA_RS01895 ]
- symbol: SA0330
- description: hypothetical protein
- length: 181
- theoretical pI: 5.64673
- theoretical MW: 20855.6
- GRAVY: -0.366851
⊟Function[edit | edit source]
- TIGRFAM: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase (TIGR03585; EC 2.3.1.202; HMM-score: 43.5)and 1 moreCellular processes Toxin production and resistance aminoglycoside N(6')-acetyltransferase, AacA4 family (TIGR04431; EC 2.3.1.82; HMM-score: 21.2)
- TheSEED :
- Ribosomal-protein-L7p-serine acetyltransferase
Protein Metabolism Protein biosynthesis Ribosome biogenesis bacterial Ribosomal-protein-L7p-serine acetyltransferaseand 1 more - PFAM: Acetyltrans (CL0257) Acetyltransf_3; Acetyltransferase (GNAT) domain (PF13302; HMM-score: 88.3)and 5 moreAcetyltransf_1; Acetyltransferase (GNAT) family (PF00583; HMM-score: 48.9)Acetyltransf_4; Acetyltransferase (GNAT) domain (PF13420; HMM-score: 41.8)Acetyltransf_8; Acetyltransferase (GNAT) domain (PF13523; HMM-score: 26.9)Acetyltransf_10; Acetyltransferase (GNAT) domain (PF13673; HMM-score: 19.4)FR47; FR47-like protein (PF08445; HMM-score: 12.4)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 9.97
- Cytoplasmic Membrane Score: 0
- Cellwall Score: 0.01
- Extracellular Score: 0.02
- Internal Helices: 0
- LocateP: Intracellular
- Prediction by SwissProt Classification: Cytoplasmic
- Pathway Prediction: No pathway
- Intracellular possibility: 1
- Signal peptide possibility: -1
- N-terminally Anchored Score: 1
- Predicted Cleavage Site: No CleavageSite
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.012131
- TAT(Tat/SPI): 0.000305
- LIPO(Sec/SPII): 0.000752
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MFGMKVNEQITLKILEAHDTEALFNLVNRSRNSLREWLPWVDATEQPSDTRAFIKRGLLQFADGNGFQCGIWYEGTLVGVIGLHEINHMHRKTSLGYYLDKQFEGHGIMTQAVEALIKYCFEELDLNRIEISAAVNNEKSRAIPERLGFTREGMLRDNELLNGIYSSSYIYSLLKSEYDQK
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: no polycistronic organisation predicted
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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