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NCBI: 26-AUG-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA0399
- pan locus tag?: SAUPAN002140000
- symbol: SA0399
- pan gene symbol?: lpl6
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SA0399
- symbol: SA0399
- product: hypothetical protein
- replicon: chromosome
- strand: +
- coordinates: 459874..460356
- length: 483
- essential: no DEG
⊟Accession numbers[edit | edit source]
- Gene ID: 1123183 NCBI
- RefSeq: NP_373650 NCBI
- BioCyc:
- MicrobesOnline: 102676 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
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481ATGAATAGAAATACTAGGACCACAACCGGTTATTTTTCAATAGAAGAAATAGATTCAAGA
AAAAGCCTTGATGAAAGAGAAACAGAAAAAAAGTATCCTGTGAAAATGATAAACAATAAA
ATTATTCCAACTGAGGAGATAAAAGATGAAAAGTTGAAAAAGGAAATTGAAAACTTTAAG
TTTTTTGTGCAATATGGCAGTTTTAAAGGAATAGAGAATTATGAAAATGGTGACATTTCC
TATAATTCTGAAGCTCCTATTTATTCAGCGAAATATAAACTGAAAAATGATGATTATAAT
GTTAAAGAATTACGAAAAAGATATAATATTCCAACAGAAAAGGCGCCTAAATTGTTGTTG
AAAGGTTCGGGGGATTTGAAAGGGTCTTCAGTTGGATATAAGGAAATTGAATTTATATTT
ATAGAAAATAAAAAAGAAAATATATATTTTTCAGATGGATTAAACTTAATTCCAAGTGAC
TAA60
120
180
240
300
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480
483
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA0399
- symbol: SA0399
- description: hypothetical protein
- length: 160
- theoretical pI: 8.61109
- theoretical MW: 18753.1
- GRAVY: -0.9425
⊟Function[edit | edit source]
- ⊞TIGRFAM: Staphylococcus tandem lipoproteins (TIGR01742; HMM-score: 219.5)and 1 more
- TheSEED :
- Tandem lipoprotein within Pathogenicity island
- PFAM: LolA_LolB (CL0048) DUF576; Csa1 family (PF04507; HMM-score: 244.3)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MNRNTRTTTGYFSIEEIDSRKSLDERETEKKYPVKMINNKIIPTEEIKDEKLKKEIENFKFFVQYGSFKGIENYENGDISYNSEAPIYSAKYKLKNDDYNVKELRKRYNIPTEKAPKLLLKGSGDLKGSSVGYKEIEFIFIENKKENIYFSDGLNLIPSD
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: no polycistronic organisation predicted
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available