Jump to navigation
Jump to search
NCBI: 26-AUG-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA0694 [new locus tag: SA_RS03955 ]
- pan locus tag?: SAUPAN002644000
- symbol: SA0694
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SA0694 [new locus tag: SA_RS03955 ]
- symbol: SA0694
- product: hypothetical protein
- replicon: chromosome
- strand: -
- coordinates: 792558..793076
- length: 519
- essential: no DEG other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 1123501 NCBI
- RefSeq: NP_373949 NCBI
- BioCyc: see SA_RS03955
- MicrobesOnline: 102975 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361
421
481ATGTATTCAAATGTTCAACCATTCATTAATAGTGATTTAACTAATTGTTTTCAATCACAA
TACACTGAAATTGAATCATTATTATTCAACCTCTTAGACAGCCCAGTAAAATATACAAAA
CATATTGGCGGTACGCATCATTTTAAATATTCAACAGAGCCAATTTTAGATATTTTAGTA
GGTGTAGAAAATTTGCATGATATTACATCCTTAGATGAAAAACGCTTAAATTATGTAGGG
TTTTATCGTTTGCATCATAAATATACTAAGAAAGTTATGATGGCGAAGTTTAACAATTTT
CATGAACTAAAACAACAGGTGCGTCTACATATCATTCAAATGAATACCCAAACATTTGAA
TCTTATCTTGCACTTGATTACCTCTTATCAACTAATGATGATATTGCTTTGCAATTCAAT
ACAAAAAAGCACCAAATATTGCAACATAGCTTAACAATTAGACAATATGAGATGCAAAAG
CAACAATACTTTGAAAAACTATGTAAAAAATACTTATAA60
120
180
240
300
360
420
480
519
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA0694 [new locus tag: SA_RS03955 ]
- symbol: SA0694
- description: hypothetical protein
- length: 172
- theoretical pI: 8.60072
- theoretical MW: 20605.5
- GRAVY: -0.485465
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED :
- FIG01108570: hypothetical protein
- PFAM: NTP_transf (CL0260) GrpB; GrpB protein (PF04229; HMM-score: 75.5)and 2 moreno clan defined T4_Gp59_C; T4 gene Gp59 loader of gp41 DNA helicase C-term (PF08994; HMM-score: 15.1)DUF4517; Domain of unknown function (DUF4517) (PF15006; HMM-score: 14.4)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- LocateP: Intracellular
- Prediction by SwissProt Classification: Cytoplasmic
- Pathway Prediction: No pathway
- Intracellular possibility: 1
- Signal peptide possibility: -1
- N-terminally Anchored Score: 1
- Predicted Cleavage Site: No CleavageSite
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.003478
- TAT(Tat/SPI): 0.000167
- LIPO(Sec/SPII): 0.001854
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MYSNVQPFINSDLTNCFQSQYTEIESLLFNLLDSPVKYTKHIGGTHHFKYSTEPILDILVGVENLHDITSLDEKRLNYVGFYRLHHKYTKKVMMAKFNNFHELKQQVRLHIIQMNTQTFESYLALDYLLSTNDDIALQFNTKKHQILQHSLTIRQYEMQKQQYFEKLCKKYL
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: no polycistronic organisation predicted
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.