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NCBI: 26-AUG-2013

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus N315
  • locus tag: SA0893 [new locus tag: SA_RS05070 ]
  • pan locus tag?: SAUPAN003241000
  • symbol: SA0893
  • pan gene symbol?: —
  • synonym:
  • product: hypothetical protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SA0893 [new locus tag: SA_RS05070 ]
  • symbol: SA0893
  • product: hypothetical protein
  • replicon: chromosome
  • strand: +
  • coordinates: 1013431..1013982
  • length: 552
  • essential: no DEG other strains

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    GTGATACGTCAAGCACGTCCAGAGGACCGATTTGATATTGCGAAGTTAGTTTATATGGTT
    TGGGATGATATGGAATTAGAATTGGTAAAGCATCTACCTAAAGACATGGTATTAGATGCA
    ATTGAAAAAAGCTGTGTTGATGCAACATATCGAACTTTTTATCAGCATATTTTAGTTTAT
    GAAGTAGAAAATAAAGTAGCAGGTTGTATTATTAGCTATAGTGGTGAAAATGAATTGAAA
    TACGAAAAAGCATGGGAACTACTTGACTTGCCAGAAGAAATAAAACAATATGGCACGCCA
    TTACCTGTAAAAGAAGCTAAAGACGATGAGTATTATATAGAAACAATTGCGACATTTGCA
    GCATATAGAGGTAGAGGCATCGCGACAAAGTTATTAACGTCATTACTTGAATCAAATACA
    CATGTTAAATGGAGTTTGAATTGCGATATTAATAATGAAGCAGCATTAAAGTTATATAAA
    AAAGTAGGCTTTATATCTGATGGACAGATTGAATTATACAAGCACATGTATCATCATTTA
    ATTGTTAAATAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    552

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SA0893 [new locus tag: SA_RS05070 ]
  • symbol: SA0893
  • description: hypothetical protein
  • length: 183
  • theoretical pI: 5.34676
  • theoretical MW: 21357.5
  • GRAVY: -0.290164

⊟Function[edit | edit source]

  • TIGRFAM:
    Genetic information processing Protein synthesis Ribosomal proteins: synthesis and modification ribosomal-protein-alanine acetyltransferase (TIGR01575; EC 2.3.1.128; HMM-score: 32.4)
    and 2 more
    Cellular processes Cellular processes Adaptations to atypical conditions diaminobutyrate acetyltransferase (TIGR02406; EC 2.3.1.178; HMM-score: 17)
    Metabolism Biosynthesis of cofactors, prosthetic groups, and carriers Glutathione and analogs mycothiol synthase (TIGR03448; EC 2.3.1.189; HMM-score: 12.3)
  • TheSEED  :
    • Acetyltransferase (GNAT family) SAS0976
  • PFAM:
    Acetyltrans (CL0257) Acetyltransf_1; Acetyltransferase (GNAT) family (PF00583; HMM-score: 42.4)
    Acetyltransf_7; Acetyltransferase (GNAT) domain (PF13508; HMM-score: 38.1)
    and 8 more
    Acetyltransf_10; Acetyltransferase (GNAT) domain (PF13673; HMM-score: 29.7)
    GNAT_acetyltran; GNAT acetyltransferase (PF12746; HMM-score: 22.8)
    Acetyltransf_3; Acetyltransferase (GNAT) domain (PF13302; HMM-score: 17.8)
    OB_enterotoxin (CL0658) Pertussis_S2S3; Pertussis toxin, subunit 2 and 3, C-terminal domain (PF02918; HMM-score: 17.1)
    Acetyltrans (CL0257) FR47; FR47-like protein (PF08445; HMM-score: 16.8)
    Acetyltransf_9; Acetyltransferase (GNAT) domain (PF13527; HMM-score: 16.8)
    Acetyltransf_CG; GCN5-related N-acetyl-transferase (PF14542; HMM-score: 15.5)
    Acetyltransf_13; ESCO1/2 acetyl-transferase (PF13880; HMM-score: 12.7)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • LocateP: Intracellular
    • Prediction by SwissProt Classification: Cytoplasmic
    • Pathway Prediction: No pathway
    • Intracellular possibility: 1
    • Signal peptide possibility: -1
    • N-terminally Anchored Score: 1
    • Predicted Cleavage Site: No CleavageSite
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.003446
    • TAT(Tat/SPI): 0.00013
    • LIPO(Sec/SPII): 0.000777
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MIRQARPEDRFDIAKLVYMVWDDMELELVKHLPKDMVLDAIEKSCVDATYRTFYQHILVYEVENKVAGCIISYSGENELKYEKAWELLDLPEEIKQYGTPLPVKEAKDDEYYIETIATFAAYRGRGIATKLLTSLLESNTHVKWSLNCDINNEAALKLYKKVGFISDGQIELYKHMYHHLIVK

⊟Experimental data[edit | edit source]

  • experimentally validated: data available for COL, NCTC8325
  • protein localization: data available for COL
  • quantitative data / protein copy number per cell: data available for COL
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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