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NCBI: 26-AUG-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA1548 [new locus tag: SA_RS08725 ]
- pan locus tag?: SAUPAN004386000
- symbol: SA1548
- pan gene symbol?: plsC
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SA1548 [new locus tag: SA_RS08725 ]
- symbol: SA1548
- product: hypothetical protein
- replicon: chromosome
- strand: -
- coordinates: 1770371..1770988
- length: 618
- essential: no DEG other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 1124394 NCBI
- RefSeq: NP_374837 NCBI
- BioCyc: see SA_RS08725
- MicrobesOnline: 103863 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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601ATGTATTCAGTGATTAGTAAGATTTTGAATTTCATTTTAGTTAAAATGTCAAAATCATTA
TACGTAATCGGTAAAGATAATATTCCTAAGGATAGTAAATATGTCGTAACTTGTACGCAT
GAAAGTTATAACGAAGTTATTATGCTAGGTATGGCATTATATCCTAATCAAATTCATTAT
ATGGCTAAAAAAGAATTATTCAAAAATAAATGGATTGGTAAATTTTTAACGTCTTTAAAT
GCATTTCCTGTAGATCGTGAAAATCCAGGACCTAGTACTTTAAAACGCCCAATCAATTTG
TTGAAAGATAATAAGACAGTTGGTATCTTCCCAACAGGTTCTCGCACATCGCAAGAAGGT
GCACCATTGAAACGTGGTGCTTCAACAATTGCAATGTTAAGTAAGTCACCAATATTACCT
GTTGCTTATGTTGGTCCTACTAAGATTCATGGTCTTTTAACAGGACAAGCATACATAAAT
ATTGGTAAACCAATCGATATTAACGATTTACCTAAAGATTTAAAACGAAACGAGCGTATC
GATTACATTACAAAAGAGATTGAAACACGAACAGCAAAGTTACAACAAGAATTGCATGAA
ATTGTAAAAAGTTTATAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA1548 [new locus tag: SA_RS08725 ]
- symbol: SA1548
- description: hypothetical protein
- length: 205
- theoretical pI: 10.227
- theoretical MW: 23073.9
- GRAVY: -0.245854
⊟Function[edit | edit source]
- TIGRFAM: Fatty acid and phospholipid metabolism Biosynthesis 1-acylglycerol-3-phosphate O-acyltransferases (TIGR00530; EC 2.3.1.51; HMM-score: 99.1)
- TheSEED :
- Acyl-ACP:1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.n4)
Fatty Acids, Lipids, and Isoprenoids Phospholipids Glycerolipid and Glycerophospholipid Metabolism in Bacteria 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)and 1 more - PFAM: Acyltransferase (CL0228) Acyltransferase; Acyltransferase (PF01553; HMM-score: 72.6)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 7.5
- Cytoplasmic Membrane Score: 1.15
- Cellwall Score: 0.62
- Extracellular Score: 0.73
- Internal Helices: 0
- LocateP: Intracellular
- Prediction by SwissProt Classification: Cytoplasmic
- Pathway Prediction: No pathway
- Intracellular possibility: 1
- Signal peptide possibility: -1
- N-terminally Anchored Score: 1
- Predicted Cleavage Site: No CleavageSite
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.051613
- TAT(Tat/SPI): 0.000379
- LIPO(Sec/SPII): 0.012932
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MYSVISKILNFILVKMSKSLYVIGKDNIPKDSKYVVTCTHESYNEVIMLGMALYPNQIHYMAKKELFKNKWIGKFLTSLNAFPVDRENPGPSTLKRPINLLKDNKTVGIFPTGSRTSQEGAPLKRGASTIAMLSKSPILPVAYVGPTKIHGLLTGQAYINIGKPIDINDLPKDLKRNERIDYITKEIETRTAKLQQELHEIVKSL
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: no polycistronic organisation predicted
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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