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PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159JSNZLGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40
NCBI: 26-AUG-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA1756
- pan locus tag?: SAUPAN005024000
- symbol: SA1756
- pan gene symbol?: —
- synonym:
- product: truncated amidase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SA1756
- symbol: SA1756
- product: truncated amidase
- replicon: chromosome
- strand: -
- coordinates: 2008105..2008311
- length: 207
- essential: no DEG
⊟Accession numbers[edit | edit source]
- Gene ID: 3251083 NCBI
- RefSeq: NP_375051 NCBI
- BioCyc:
- MicrobesOnline: 104077 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181GTGAGGGATGGCTATTCAACTAATTCAAGAATTACAGGTGTATTACCCAATAACGCAACG
ATCAAATATGACGGCGCATATTGCATTAATGGCTATAGATGGATTACTTATATTGCTAAT
AGTGGACAACGTCGTTATATAGCGACAGGAGAGGTAGACAAGGCAGGTAATAGAATAAGC
GGTTTTGGTAAGTTTAGTGCAGTTTGA60
120
180
207
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA1756
- symbol: SA1756
- description: truncated amidase
- length: 68
- theoretical pI: 9.99622
- theoretical MW: 7501.34
- GRAVY: -0.439706
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED :
- Phage endolysin N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)
- ⊞PFAM: SH3 (CL0010) SH3_5; Bacterial SH3 domain (PF08460; HMM-score: 35.8)and 1 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MRDGYSTNSRITGVLPNNATIKYDGAYCINGYRWITYIANSGQRRYIATGEVDKAGNRISGFGKFSAV
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available