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PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS00270 [old locus tag: SACOL0051 ]
  • pan locus tag?: SAUPAN000667000
  • symbol: SACOL_RS00270
  • pan gene symbol?: —
  • synonym:
  • product: hypothetical protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SACOL_RS00270 [old locus tag: SACOL0051 ]
  • symbol: SACOL_RS00270
  • product: hypothetical protein
  • replicon: chromosome
  • strand: +
  • coordinates: 61982..63598
  • length: 1617
  • essential: unknown

⊟Accession numbers[edit | edit source]

  • Location: NC_002951 (61982..63598) NCBI
  • BioCyc: SACOL_RS00270 BioCyc
  • MicrobesOnline: see SACOL0051

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
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    1021
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    ATGGAATTTGAACATAAATTAGAGAAATTAATATCTGAAGTAAATAATAAGACTGAAATT
    AATAATTATGTTTTTTTTAGTTTAGGTAAGTCAAGTGTTAAAGCACAGGTTAAGTTATTA
    AAAAAAACTAATTATCTCAAACAAGATATTTCAAAATTGGCACTTAAATTTAAAAAGAAA
    TCTGGGGAATTTCCTGAGTGGATTAAATTAGATATTGTAACCTCGACTGAAAAAATATTA
    TTTAAAGAATTAAAAAAAACACTGATCAATACAAGAAGAAATTATGTAGATTTTGGTATA
    GCATTTGATAGTCAATGGAATTTTGCAGTATTACCTGAAGAAATTAACGCGAATGCTTTT
    GTTCGACCAGATAATACTACTAAAGAGTTATTTCTTTCGGAAAAAAACATCAATAATTAT
    TTACGCAAATATACTACAAATAAAAAGGCATTTTCTAGTGAGTTCTATAATGAAAAAGAA
    GTTATTAAATTCTATACACAAGGTTTCTTTATAGGTGATGAAGAAGTACATGAACTATAT
    AGCGAAGGCTATAAAAAAGGTTTAAGAAAAGTAAATGATTTAAATAATGAAATTGATCAA
    TTAATTGAAAGTAGTACTAATTTCTTACAAAATATGTTGTTAGATAATGGTAAATATATT
    TATGGATATTTTCCTCATTTTGATAATGAAATTGGATTCTACAATGTTTTAAGACACTCT
    TCTTCTACTTATGCCTTAATTGAGGGTCTGTCCTATTTAGGTAAAAGCTTACAACCTGTT
    GAAAAAGCAATTGATTATATCATTTTAAATCAACTGTTTGAGATTGGTGATAAAGCCTAT
    ATCTTTGATGATACAGAGGAAGCAAATGAAATCAAATTAGGACAAAATGCTTCATTTATA
    TTCGCAGTTTGTGAATATTTAAAGCATGAAGATAATCCTAAATTTCTTGAGTCAGCTCAG
    AAAGTGGCTAAAGGTATTCTTTCAATGATAGATGAAGATACATATGAGACAACTCACTTA
    TTGAATTATCCTGATTTAAGCGTAAAAGAGAAGTTTAGAATTATTTATTACGATGGTGAA
    GCAGCGCTTGCTTTATTGAGATTGTATCAAAAGGATGAAAATGAACTATGGCTAAAAACT
    GTAGAAAATTTGATGGACCGTTTCATTGAGAAGAAATATTGGCAATATCATGATCATTGG
    TTAGGATATTGTACGAATGAATTAGTTCAAATTAATCCACAAGACAAATATTTTGAATTT
    GGAATCAAAAATGTGAATAATTACTTAGATTATATTAAAAATCGTGAAACAACATTTCCA
    ACATTCTTAGAAATGTTAATGGCCACATATAGATTAGTTCAAAAAGCGAAAGATACGGGT
    CGCGAGGAATTGGTAAACAATTTAATAGATGAACAATATTTGATAGATGTAATTAATATT
    AGAGCAGATTATCAAAGAGTTGGATTCTTTTATCCTGAAATTGCTATGTATTTTAAAAAC
    CCATCAAGAATACTAGGAAGTTTCTTTATTAAACACCACGGTTATCGTGTTCGAATTGAT
    GATATCGAACATTATTTATCTGGATATGTACAATATCAGCTTGCATTTAATAGGTAA
    60
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    1617

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SACOL_RS00270 [old locus tag: SACOL0051 ]
  • symbol: SACOL_RS00270
  • description: hypothetical protein
  • length: 538
  • theoretical pI: 5.87664
  • theoretical MW: 63743
  • GRAVY: -0.479182

⊟Function[edit | edit source]

  • TIGRFAM:
  • TheSEED: see SACOL0051
  • PFAM:
    PKinase (CL0016) Alpha_kinase; Alpha-kinase family (PF02816; HMM-score: 11.5)
    no clan defined ArAE_1_C; Putative aromatic acid exporter C-terminal domain (PF11728; HMM-score: 10.3)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.007158
    • TAT(Tat/SPI): 0.000502
    • LIPO(Sec/SPII): 0.000595
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MEFEHKLEKLISEVNNKTEINNYVFFSLGKSSVKAQVKLLKKTNYLKQDISKLALKFKKKSGEFPEWIKLDIVTSTEKILFKELKKTLINTRRNYVDFGIAFDSQWNFAVLPEEINANAFVRPDNTTKELFLSEKNINNYLRKYTTNKKAFSSEFYNEKEVIKFYTQGFFIGDEEVHELYSEGYKKGLRKVNDLNNEIDQLIESSTNFLQNMLLDNGKYIYGYFPHFDNEIGFYNVLRHSSSTYALIEGLSYLGKSLQPVEKAIDYIILNQLFEIGDKAYIFDDTEEANEIKLGQNASFIFAVCEYLKHEDNPKFLESAQKVAKGILSMIDEDTYETTHLLNYPDLSVKEKFRIIYYDGEAALALLRLYQKDENELWLKTVENLMDRFIEKKYWQYHDHWLGYCTNELVQINPQDKYFEFGIKNVNNYLDYIKNRETTFPTFLEMLMATYRLVQKAKDTGREELVNNLIDEQYLIDVINIRADYQRVGFFYPEIAMYFKNPSRILGSFFIKHHGYRVRIDDIEHYLSGYVQYQLAFNR

⊟Experimental data[edit | edit source]

  • experimentally validated: see SACOL0051
  • protein localization: see SACOL0051
  • quantitative data / protein copy number per cell: see SACOL0051
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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