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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus COL
- locus tag: SACOL_RS01595 [old locus tag: SACOL0316 ]
- pan locus tag?: SAUPAN001243000
- symbol: SACOL_RS01595
- pan gene symbol?: —
- synonym:
- product: histidine transporter
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SACOL_RS01595 [old locus tag: SACOL0316 ]
- symbol: SACOL_RS01595
- product: histidine transporter
- replicon: chromosome
- strand: -
- coordinates: 351029..352342
- length: 1314
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
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1261ATGAATCAATATCATTCTAATGCACAACAACCAAGTGCATGGCGTTTTTTTGTCTATAGT
TTAGTGGGCATACTATGTTTCTTTATTCCTTTTACGATTAATGGTAACAACACTATTTTC
GTCGATCATGTTCATCTAGCCATTCGCTCAATCATAGGTCCACTTATGCCCTATGTTGCA
CTGATTATGATTTTAATTGGTACAGCGTTACCAATAGTGAGACGTACTTTTATGACTTCA
ATCACAAACTTGGTCATTACATTATTTAAAGTTGCAGGTGCAATGATCGGTATAATGTAT
GTATTTAAAATCGGTCCATCAATACTATTTAAAGCTAACTATGGTCCGTTTTTGTTTGAA
AAATTAATGATGCCATTAAGTATCTTAATTCCAGTAGGTGCAATTGCGCTTTCTTTATTA
GTGGGCTATGGCTTATTAGAATTTGTCGGTGTTTATATGGAGCCTATTATGAGACCTATT
TTTAAAACACCAGGAAAATCCGCTGTCGATGCAGTGGCTTCGTTTGTCGGCAGTTATTCC
TTAGGATTATTGATTACTAATCGTGTCTATAAGCAAGGGATGTACAACAAACGAGAAGCC
ACGATTATTGCGACTGGCTTTTCAACAGTTTCAGCAACTTTTATGATTATCGTTGCTAAA
ACTTTAGGATTAATGCCGCATTGGAATTTATACTTTTGGATAACTTTAGTCATCACATTT
GTCGTGACTGCAATTACTGCATGGCTACCGCCAATCAGCAATGAATCAACAGAATATTAT
AACGGACAAGAAGGAGAACAAGAAGTTGCTATTGAAGGAAGCAGACTGAAAACTGCATAT
GCAGAGGCGATGAAACAAAATGCATTAACACCATCTCTCGTGAAGAACGTTTGGGACAAT
TTGAAAGACGGTTTAGAAATGACTGTTGGTATTTTACCTTCTATATTATCGATTGGTTTT
TTAGGACTGATTGTAGCGAACTATACACCATTCATTGATTGGCTTGGCTATATCTTCTAT
CCATTTATTTATATTTTCCCAATTGCTGATCAGGCTTTACTAGCAAAAGCGTCAGCGATT
TCTATTGTAGAGATGTTTCTACCATCTTTGTTAGTAACTAAAGCTGCAATGAGTACTAAA
TTTGTCGTCGGTGTAGTAAGCGTATCAGCCATTATCTTTTTCTCAGCATTAGTGCCATGT
ATACTAGCAACTGAAATTAAAATACCTGTCTGGAAACTCATCATCATTTGGTTTTTACGC
GTGGCGTTGTCGCTATTAATCACCATCCCCGTCGCTTTACTTATTTTTGGATAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SACOL_RS01595 [old locus tag: SACOL0316 ]
- symbol: SACOL_RS01595
- description: histidine transporter
- length: 437
- theoretical pI: 9.47963
- theoretical MW: 48281.6
- GRAVY: 0.881693
⊟Function[edit | edit source]
- TIGRFAM: Cellular processes Sporulation and germination sporulation integral membrane protein YlbJ (TIGR02871; HMM-score: 28.4)
- TheSEED: see SACOL0316
- PFAM: no clan defined Gate; Nucleoside recognition (PF07670; HMM-score: 37.1)and 1 moreDUF3742; Protein of unknown function (DUF3742) (PF12553; HMM-score: 13.8)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 10
- Cellwall Score: 0
- Extracellular Score: 0
- Internal Helices: 12
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.02089
- TAT(Tat/SPI): 0.000385
- LIPO(Sec/SPII): 0.018297
- predicted transmembrane helices (TMHMM): 12
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MNQYHSNAQQPSAWRFFVYSLVGILCFFIPFTINGNNTIFVDHVHLAIRSIIGPLMPYVALIMILIGTALPIVRRTFMTSITNLVITLFKVAGAMIGIMYVFKIGPSILFKANYGPFLFEKLMMPLSILIPVGAIALSLLVGYGLLEFVGVYMEPIMRPIFKTPGKSAVDAVASFVGSYSLGLLITNRVYKQGMYNKREATIIATGFSTVSATFMIIVAKTLGLMPHWNLYFWITLVITFVVTAITAWLPPISNESTEYYNGQEGEQEVAIEGSRLKTAYAEAMKQNALTPSLVKNVWDNLKDGLEMTVGILPSILSIGFLGLIVANYTPFIDWLGYIFYPFIYIFPIADQALLAKASAISIVEMFLPSLLVTKAAMSTKFVVGVVSVSAIIFFSALVPCILATEIKIPVWKLIIIWFLRVALSLLITIPVALLIFG
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator: HutR* see SACOL0316
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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