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NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS03395 [old locus tag: SACOL0656 ]
  • pan locus tag?: SAUPAN002466000
  • symbol: SACOL_RS03395
  • pan gene symbol?: —
  • synonym:
  • product: flavodoxin family protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SACOL_RS03395 [old locus tag: SACOL0656 ]
  • symbol: SACOL_RS03395
  • product: flavodoxin family protein
  • replicon: chromosome
  • strand: +
  • coordinates: 685379..685915
  • length: 537
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

  • Location: NC_002951 (685379..685915) NCBI
  • BioCyc: SACOL_RS03395 BioCyc
  • MicrobesOnline: see SACOL0656

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGATTACTGTTTTGTTTGGTGGGAGTAGACCAAACGGTAATACTGCACAATTAACAAAA
    TTCGCTTTGCAAGATTTAGAGTATCAATGGATTGACGTGACACAACATCAGTTTAAACCG
    ATACGTGACGTGAGACATACAGCAGAGACTATTACTTCATATGACGATGACTATTTGCCG
    ATTCTAGATAAAATATTGGCTAGTGATACAATTATTTTTGCATCACCAGTGTATTGGTAT
    AGCATTTCAGCACCATTGAAAGCATTTATCGAACATTGGTCAGAAACATTACAAGATAAA
    CGATATCCTAATTTTAAGGCACAAATGGCCGAAAAGGATTTTAGAGTTATTTTAGTTGGT
    GGAGATTGTCCAAAAATAAAAGCGAAGCCAGCAATTACGCAAATGAAATATAGTTTAGAC
    TTTTTAGGTGCCACTTTAAATGGTTATATTATTGGAACTGCTGAAAAGCCTGGTGACATC
    ATGAAAGACAACTATGCCTTAGCACGTGCAACTGAGTGGAATAGTATATTGCAATAA
    60
    120
    180
    240
    300
    360
    420
    480
    537

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SACOL_RS03395 [old locus tag: SACOL0656 ]
  • symbol: SACOL_RS03395
  • description: flavodoxin family protein
  • length: 178
  • theoretical pI: 6.26176
  • theoretical MW: 20243
  • GRAVY: -0.241011

⊟Function[edit | edit source]

  • TIGRFAM:
    FMN reductase (TIGR03566; EC 1.5.1.-; HMM-score: 19.4)
    Metabolism Central intermediary metabolism Sulfur metabolism FMN reductase (TIGR03567; EC 1.5.1.38; HMM-score: 19.4)
    and 1 more
    LLM-partnered FMN reductase, CE1759 family (TIGR04037; EC 1.-.-.-; HMM-score: 12.1)
  • TheSEED: see SACOL0656
  • PFAM:
    Flavoprotein (CL0042) FMN_red; NADPH-dependent FMN reductase (PF03358; HMM-score: 62)
    and 3 more
    Flavodoxin_2; Flavodoxin-like fold (PF02525; HMM-score: 44.2)
    Flavodoxin_5; Flavodoxin domain (PF12724; HMM-score: 13.8)
    vWA-like (CL0128) DUF1194; Protein of unknown function (DUF1194) (PF06707; HMM-score: 13.1)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: unknown (no significant prediction)
    • Cytoplasmic Score: 2.5
    • Cytoplasmic Membrane Score: 2.5
    • Cellwall Score: 2.5
    • Extracellular Score: 2.5
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.002733
    • TAT(Tat/SPI): 0.00022
    • LIPO(Sec/SPII): 0.000653
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MITVLFGGSRPNGNTAQLTKFALQDLEYQWIDVTQHQFKPIRDVRHTAETITSYDDDYLPILDKILASDTIIFASPVYWYSISAPLKAFIEHWSETLQDKRYPNFKAQMAEKDFRVILVGGDCPKIKAKPAITQMKYSLDFLGATLNGYIIGTAEKPGDIMKDNYALARATEWNSILQ

⊟Experimental data[edit | edit source]

  • experimentally validated: see SACOL0656
  • protein localization: see SACOL0656
  • quantitative data / protein copy number per cell: see SACOL0656
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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