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Pangenome04-0298108BA0217611819-97685071193COLECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50N315NCTC8325NewmanRF122ST398T0131TCH60TW20USA300_FPR3757USA300_TCH1516VC40

NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS14845 [old locus tag: SACOL2015 ]
  • pan locus tag?: SAUPAN005256000
  • symbol: SACOL_RS14845
  • pan gene symbol?: —
  • synonym:
  • product: site-specific integrase

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS, pseudogene
  • locus tag: SACOL_RS14845 [old locus tag: SACOL2015 ]
  • symbol: SACOL_RS14845
  • product: site-specific integrase
  • replicon: chromosome
  • strand: +
  • coordinates: <2075383..2075929
  • length: 547
  • essential: unknown

⊟Accession numbers[edit | edit source]

  • Location: NC_002951 <2075383..2075929 NCBI
  • BioCyc: G1G4B-2213 BioCyc
  • MicrobesOnline:

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    GCCCCGTTAACTAGCTTTGAAGTCTTTAGCACACTTGCATATACCGGCTGTCGTGCTGGC
    GAGATACTAGCATTGAAGTGGTCTGATATTGATTTTGAAAACAACACGATTAGTATTACT
    AAAACATATTACAATCCAAATAATAACAAGAAGAAATATCAGATACTTCCCCCTAAAACT
    GAAAGTTCTATCGGTAAGATTTCCGTTGACCCAAATGTAATAAAGGTGTTGCGTGATTAT
    AAGATAAACGTTCAAAATAATTGGAAAAACGAATTATATAATGATAACCATTGTAATGAA
    AAAACTATCAATGTGGATACAAACCATTATGTCACGTACCAGCATACTCAAAAATATCTC
    TACGCACTCATTCAGATACACACATTGCGCATTGCTCATAGAATCAGGTGTACACATTAA
    AGAAATACAAGAACGATTACGGCATAAAGATATCAATACCACTATGAATATCTATGCTAA
    AATCACAAATTCATACAAAAAAGACGCCTCCCATAAGTTTAGTCACCAAATGGAAGACGT
    CTCGTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    547

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SACOL_RS14845 [old locus tag: SACOL2015 ]
  • symbol: SACOL_RS14845
  • description: site-specific integrase
  • length: 0
  • theoretical pI:
  • theoretical MW:
  • GRAVY:

⊟Function[edit | edit source]

  • TIGRFAM:
  • TheSEED:
  • PFAM:

⊟Structure, modifications & interactions[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

⊟Localization[edit | edit source]

  • PSORTb:
  • LocateP:
  • SignalP:
  • predicted transmembrane helices (TMHMM):

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq:
  • UniProt:

⊟Protein sequence[edit | edit source]

⊟Experimental data[edit | edit source]

  • experimentally validated: no data available

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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