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⊟Summary[edit | edit source]
- pan ID?: SAUPAN000014000
- symbol?: hutH
- synonym:
- description?: histidine ammonia-lyase
- histidine ammonia-lyase
- putative histidine ammonia-lyase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 16725..17895
- synteny block?: BlockID0000110
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0008 (hutH)
08BA02176:
C248_0008 (hutH)
11819-97:
MS7_0008 (hutH)
6850:
RSAU_000008 (hutH)
71193:
ST398NM01_0008
ECT-R 2:
ECTR2_8 (hutH)
ED133:
SAOV_0008 (hutH)
ED98:
SAAV_0008 (hutH)
HO 5096 0412:
SAEMRSA15_00080 (hutH)
JH1:
SaurJH1_0008
JH9:
SaurJH9_0008
JKD6008:
SAA6008_00008 (hutH)
JKD6159:
SAA6159_00008 (hutH)
LGA251:
SARLGA251_00080 (hutH)
M013:
M013TW_0009
MRSA252:
SAR0008 (hutH)
MSHR1132:
SAMSHR1132_00080
MSSA476:
SAS0008 (hutH)
Mu3:
SAHV_0008 (hutH)
Mu50:
SAV0008 (hutH)
MW2:
MW0008 (hutH)
RF122:
SAB0008 (hutH)
ST398:
SAPIG0008 (hutH)
T0131:
SAT0131_00008
TCH60:
HMPREF0772_10460 (hutH)
TW20:
SATW20_00080 (hutH)
USA300_TCH1516:
USA300HOU_0008 (hutH)
VC40:
SAVC_00040
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTLYLDGETLTIEDIKSFLQQQSKIEIIDDALERVKKSRAVVERIIENEETVYGITTGFG
N315 MTLYLDGETLTIEDIKSFLQQQSKIEIIDDALERVKKSRAVVERIIENEETVYGITTGFG
NCTC8325 MTLYLDGETLTIEDIKSFLQQQSKIEIIDDALERVKKSRAVVERIIENEETVYGITTGFG
Newman MTLYLDGETLTIEDIKSFLQQQSKIEIIDDALERVKKSRAVVERIIENEETVYGITTGFG
USA300_FPR3757 MTLYLDGETLTIEDIKSFLQQQSKIEIIDDALERVKKSRAVVERIIENEETVYGITTGFG
************************************************************
COL LFSDVRIDPTQYNELQVNLIRSHACGLGEPFSKEVALVMMILRLNTLLKGHSGATLELVR
N315 LFSDVRIDPTQYNELQVNLIRSHACGLGEPFSKEVALVMMILRLNTLLKGHSGATLELVR
NCTC8325 LFSDVRIDPTQYNELQVNLIRSHACGLGEPFSKEVALVMMILRLNTLLKGHSGATLELVR
Newman LFSDVRIDPTQYNELQVNLIRSHACGLGEPFSKEVALVMMILRLNTLLKGHSGATLELVR
USA300_FPR3757 LFSDVRIDPTQYNELQVNLIRSHACGLGEPFSKEVALVMMILRLNTLLKGHSGATLELVR
************************************************************
COL QLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIGEGKVLYRGEEKDSDDVLRELNR
N315 QLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIGEGKVLYRGEEKDSDDVLRELNR
NCTC8325 QLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIGEGKVLYRGEEKDSDDVLRELNR
Newman QLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIGEGKVLYRGEEKDSDDVLRELNR
USA300_FPR3757 QLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIGEGKVLYRGEEKDSDDVLRELNR
************************************************************
COL QPLNLQAKEGLALINGTQAMTAQGVISYIEAEDLGYQSEWIAALTHQSLNGIIDAYRHDV
N315 QPLNLQAKEGLALINGTQAMTAQGVISYIEAEDLGYQSEWIAALTHQSLNGIIDAYRHDV
NCTC8325 QPLNLQAKEGLALINGTQAMTAQGVISYIEAEDLGYQSEWIAALTHQSLNGIIDAYRHDV
Newman QPLNLQAKEGLALINGTQAMTAQGVISYIEAEDLGYQSEWIAALTHQSLNGIIDAYRHDV
USA300_FPR3757 QPLNLQAKEGLALINGTQAMTAQGVISYIEAEDLGYQSEWIAALTHQSLNGIIDAYRHDV
************************************************************
COL HAVRNFQEQINVAARMRDWLEGSTLTTRQSEIRVQDAYTLRCIPQIHGASFQVFNYVKQQ
N315 HSVRNFQEQINVAARMRDWLEGSTLTTRQAEIRVQDAYTLRCIPQIHGASFQVFNYVKQQ
NCTC8325 HAVRNFQEQINVAARMRDWLEGSTLTTRQSEIRVQDAYTLRCIPQIHGASFQVFNYVKQQ
Newman HAVRNFQEQINVAARMRDWLEGSTLTTRQSEIRVQDAYTLRCIPQIHGASFQVFNYVKQQ
USA300_FPR3757 HAVRNFQEQINVAARMRDWLEGSTLTTRQSEIRVQDAYTLRCIPQIHGASFQVFNYVKQQ
*:***************************:******************************
COL LEFEMNAANDNPLIFEEANETFVISGGNFHGQPIAFALDHLKLGVSELANVSERRLERLV
N315 LEFEMNAANDNPLIFEEANETFVISGGNFHGQPIAFALDHLKLGVSELANVSERRLERLV
NCTC8325 LEFEMNAANDNPLIFEEANETFVISGGNFHGQPIAFALDHLKLGVSELANVSERRLERLV
Newman LEFEMNAANDNPLIFEEANETFVISGGNFHGQPIAFALDHLKLGVSELANVSERRLERLV
USA300_FPR3757 LEFEMNAANDNPLIFEEANETFVISGGNFHGQPIAFALDHLKLGVSELANVSERRLERLV
************************************************************
COL NPQLNGDLPAFLSPEPGLQSGAMIMQYAAASLVSENKTLAHPASVDSITSSANQEDHVSM
N315 NPQLNGDLPAFLSPEPGLQSGAMIMQYAAASLVSENKTLAHPASVDSITSSANQEDHVSM
NCTC8325 NPQLNGDLPAFLSPEPGLQSGAMIMQYAAASLVSENKTLAHPASVDSITSSANQEDHVSM
Newman NPQLNGDLPAFLSPEPGLQSGAMIMQYAAASLVSENKTLAHPASVDSITSSANQEDHVSM
USA300_FPR3757 NPQLNGDLPAFLSPEPGLQSGAMIMQYAAASLVSENKTLAHPASVDSITSSANQEDHVSM
************************************************************
COL GTTAARHGYQIIENARRVLAIECVIALQAAELKGVEGLSPKTRRKYDEFRSIVPSITHDR
N315 GTTAARHGYQIIENARRVLAIECVIALQAAELKGVEGLSPKTRRKYEEFRSIVPSITHDR
NCTC8325 GTTAARHGYQIIENARRVLAIECVIALQAAELKGVEGLSPKTRRKYDEFRSIVPSITHDR
Newman GTTAARHGYQIIENARRVLAIECVIALQAAELKGVEGLSPKTRRKYDEFRSIVPSITHDR
USA300_FPR3757 GTTAARHGYQIIENARRVLAIECVIALQAAELKGVEGLSPKTRRKYDEFRSIVPSITHDR
**********************************************:*************
COL QFHKDIEAVAQYLKQSIYQTTACH
N315 QFHKDIEAVAQYLKQSIYQTTACH
NCTC8325 QFHKDIEAVAQYLKQSIYQTTACH
Newman QFHKDIEAVAQYLKQSIYQTTACH
USA300_FPR3757 QFHKDIEAVAQYLKQSIYQTTACH
************************