⊟Summary[edit | edit source]

pan ID^?: SAUPAN000036000
symbol^?: walJ
synonym:
description^?: MBL fold metallo-hydrolase
- MBL fold metallo-hydrolase
- metallo-beta-lactamase family protein
- metallo-beta-lactamase superfamily protein
- metallo-beta-lactamase YycJ
- YycJ
- Zn-dependent hydrolase (beta-lactamase superfamily)
- beta-lactamase domain-containing protein
- Beta-lactamase domain protein
- metallo-beta-lactamase family protein YycJ
- metallo-beta-lactamase hydrolase
- YycJ protein
strand^?: +
coordinates^?: 36416..37217
synteny block^?: BlockID0000330
occurrence^?: in 100% of 34 strains

walJ (yycJ) : cell wall-embedded 5'-3' exonuclease and cell division protein WalJ ^[1]

⊟Orthologs[edit | edit source]

COL:

SACOL0023 (yycJ)

N315:

NCTC8325:

Newman:

USA300_FPR3757:

04-02981:

SA2981_0022

08BA02176:

C248_0025 (yycJ)

11819-97:

MS7_0024

6850:

RSAU_000024 (yycJ)

71193:

ST398NM01_0024

ECT-R 2:

ECTR2_24

ED133:

SAOV_0024 (yycJ)

ED98:

SAAV_0026 (yycJ)

HO 5096 0412:

SAEMRSA15_00220 (yycJ)

JH1:

SaurJH1_0022

JH9:

SaurJH9_0022

JKD6008:

SAA6008_00022 (yycJ)

JKD6159:

SAA6159_00022 (yycJ)

JSNZ:

JSNZ_000024

LGA251:

SARLGA251_00220 (yycJ)

M013:

M013TW_0025

MRSA252:

SAR0022 (yycJ)

MSHR1132:

SAMSHR1132_00230

MSSA476:

SAS0022

Mu3:

SAHV_0022

Mu50:

SAV0022

MW2:

MW0022

RF122:

SAB0022 (yycJ)

ST398:

SAPIG0024

T0131:

SAT0131_00024 (rpsA)

TCH60:

HMPREF0772_10446

TW20:

SATW20_00220 (yycJ)

USA300_TCH1516:

USA300HOU_0022

VC40:

SAVC_00110

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

alignment of orthologues:
CLUSTAL format alignment by MAFFT L-INS-i (v7.307)

COL             MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTH
N315            MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTH
NCTC8325        MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTH
Newman          MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTH
USA300_FPR3757  MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTH
                ************************************************************

COL             EHIDHIKGLGVLARKYQLPIYANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVES
N315            EHIDHIKGLGVLARKYQLPIYANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVES
NCTC8325        EHIDHIKGLGVLARKYQLPIYANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVES
Newman          EHIDHIKGLGVLARKYQLPIYANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVES
USA300_FPR3757  EHIDHIKGLGVLARKYQLPIYANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVES
                ************************************************************

COL             FNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIRGSDAFIFESNHDVDMLRMCR
N315            FNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIRGSDAFIFESNHDVDMLRMCR
NCTC8325        FNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIRGSDAFIFESNHDVDMLRMCR
Newman          FNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIRGSDAFIFESNHDVDMLRMCR
USA300_FPR3757  FNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIRGSDAFIFESNHDVDMLRMCR
                ************************************************************

COL             YPWKTKQRILGDMGHVSNEDAAHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
N315            YPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
NCTC8325        YPWKTKQRILGDMGHVSNEDAAHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
Newman          YPWKTKQRILGDMGHVSNEDAAHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
USA300_FPR3757  YPWKTKQRILGDMGHVSNEDAAHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
                *********************.**************************************

COL             EHDIDTEKEVLLCDTDKAIPTPIYTI
N315            EHDIDTEKEVLLCDTDKAIPTPIYTI
NCTC8325        EHDIDTEKEVLLCDTDKAIPTPIYTI
Newman          EHDIDTEKEVLLCDTDKAIPTPIYTI
USA300_FPR3757  EHDIDTEKEVLLCDTDKAIPTPIYTI
                **************************

↑ Steven J Biller, Kyle J Wayne, Malcolm E Winkler, William F Burkholder
The putative hydrolase YycJ (WalJ) affects the coordination of cell division with DNA replication in Bacillus subtilis and may play a conserved role in cell wall metabolism.
J Bacteriol: 2011, 193(4);896-908
[PubMed:21169496] [WorldCat.org] [DOI] (I p)Olivier Poupel, Mati Moyat, Julie Groizeleau, Luísa C S Antunes, Simonetta Gribaldo, Tarek Msadek, Sarah Dubrac
Transcriptional Analysis and Subcellular Protein Localization Reveal Specific Features of the Essential WalKR System in Staphylococcus aureus.
PLoS One: 2016, 11(3);e0151449
[PubMed:26999783] [WorldCat.org] [DOI] (I e)Hanjing Yang, Madeline Yung, Lei Li, James A Hoch, Christopher M Ryan, Upendra K Kar, Puneet Souda, Julian P Whitelegge, Jeffrey H Miller
Evidence that YycJ is a novel 5'-3' double-stranded DNA exonuclease acting in Bacillus anthracis mismatch repair.
DNA Repair (Amst): 2013, 12(5);334-46
[PubMed:23491602] [WorldCat.org] [DOI] (I p)

[1] Steven J Biller, Kyle J Wayne, Malcolm E Winkler, William F Burkholder
The putative hydrolase YycJ (WalJ) affects the coordination of cell division with DNA replication in Bacillus subtilis and may play a conserved role in cell wall metabolism.
J Bacteriol: 2011, 193(4);896-908
[PubMed:21169496] [WorldCat.org] [DOI] (I p)Olivier Poupel, Mati Moyat, Julie Groizeleau, Luísa C S Antunes, Simonetta Gribaldo, Tarek Msadek, Sarah Dubrac
Transcriptional Analysis and Subcellular Protein Localization Reveal Specific Features of the Essential WalKR System in Staphylococcus aureus.
PLoS One: 2016, 11(3);e0151449
[PubMed:26999783] [WorldCat.org] [DOI] (I e)Hanjing Yang, Madeline Yung, Lei Li, James A Hoch, Christopher M Ryan, Upendra K Kar, Puneet Souda, Julian P Whitelegge, Jeffrey H Miller
Evidence that YycJ is a novel 5'-3' double-stranded DNA exonuclease acting in Bacillus anthracis mismatch repair.
DNA Repair (Amst): 2013, 12(5);334-46
[PubMed:23491602] [WorldCat.org] [DOI] (I p)

[1]

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Contents

⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

COL
N315
NCTC8325
Newman
USA300_FPR3757

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⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]