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⊟Summary[edit | edit source]
- pan ID?: SAUPAN000102000
- symbol?: mecR1
- synonym:
- description?: beta-lactam sensor/signal transducer MecR1
- beta-lactam sensor/signal transducer MecR1
- methicillin-resistance MecR1 regulatory protein
- methicillin resistance protein
- methicillin resistance regulatory protein MecR1
- Beta-lactamase
- Methicillin resistance mecR1 protein
- methicillin resistance protein MecR (fragment)
- Methicillin resistance regulatory sensor-transducer MecR1
- peptidase M48 family protein
- pseudogene
- truncated methicillin resistance protein MecR1
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 120800..122796
- synteny block?: BlockID0000800
- occurrence?: in 58% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0040 (mecR1)
08BA02176:
—
11819-97:
MS7_0034
6850:
—
71193:
—
ECT-R 2:
—
ED133:
—
ED98:
—
HO 5096 0412:
SAEMRSA15_00320 (mecR)
JH1:
SaurJH1_0030
JH9:
SaurJH9_0030
JKD6008:
SAA6008_00040 (mecR1)
JKD6159:
SAA6159_00032 (mecR1)
LGA251:
—
M013:
—
MRSA252:
SAR0040 (mecR1)
MSHR1132:
SAMSHR1132_00330
MSSA476:
—
Mu3:
SAHV_0041 (mecR1)
Mu50:
SAV0042 (mecR1)
MW2:
MW0032
RF122:
—
ST398:
—
T0131:
SAT0131_00035
TCH60:
HMPREF0772_10434 (mecR)
TW20:
SATW20_00750 (mecR1)
USA300_TCH1516:
USA300HOU_0032 (mecR1)
VC40:
—
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MLSSFLMLSIISSLLTICVIFLVRMLYIKYTQNIMSHKIWLLVLVSTLIPLIPFYKISNF
N315 MLSSFLMLSIISSLLTICVIFLVRMLYIKYTQNIMSHKIWLLVLVSTLIPLIPFYKISNF
USA300_FPR3757 MLSSFLMLSIISSLLTICVIFLVRMLYIKYTQNIMSHKIWLLVLVSTLIPLIPFYKISNF
************************************************************
COL TFSKDMMNRNVSDTTSSVSHMLDGQQSSVTKDLAINVNQFETSNITYMILLIWVFGSLLC
N315 TFSKDMMNRNVSDTTSSVSHMLDGQQSSVTKDLAINVNQFETSNITYMILLIWVFGSLLC
USA300_FPR3757 TFSKDMMNRNVSDTTSSVSHMLDGQQSSVTKDLAINVNQFETSNITYMILLIWVFGSLLC
************************************************************
COL LFYMIKAFRQIDVIKSSSLESSYLNERLKVCQSKMQFYKKHITISYSSNIDNPMVFGLVK
N315 LFYMIKAFRQIDVIKSSSLESSYLNERLKVCQSKMQFYKKHITISYSSNIDNPMVFGLVK
USA300_FPR3757 LFYMIKAFRQIDVIKSSSLESSYLNERLKVCQSKMQFYKKHITISYSSNIDNPMVFGLVK
************************************************************
COL SQIVLPTVVVETMNDKEIEYIILHELSHVKSHDLIFNQLYVVFKMIFWFNPALYISKTMM
N315 SQIVLPTVVVETMNDKEIEYIILHELSHVKSHDLIFNQLYVVFKMIFWFNPALYISKTMM
USA300_FPR3757 SQIVLPTVVVETMNDKEIEYIILHELSHVKSHDLIFNQLYVVFKMIFWFNPALYISKTMM
************************************************************
COL DNDCEKVCDRNVLKILNRHEHIRYGESILKCSILKSQHINNVAAQYLLGFNSNIKERVKY
N315 DNDCEKVCDRNVLKILNRHEHIRYGESILKCSILKSQHINNVAAQYLLGFNSNIKERVKY
USA300_FPR3757 DNDCEKVCDRNVLKILNRHEHIRYGESILKCSILKSQHINNVAAQYLLGFNSNIKERVKY
************************************************************
COL IALYDSMPKPNRNKRIVAYIVCSIS-----------------------------------
N315 IALYDSMPKPNRNKRIVAYIVCSISLLIQAPLLSAHVQQDKYETNVSYKKLNQLAPYFKG
USA300_FPR3757 IALYDSMPKPNRNKRIVAYIVCSIS-----------------------------------
*************************
COL ---SFT------------------------------------------------------
N315 FDGSFVLYNEREQAYSIYNEPESKQRYSPNSTYKIYLALMAFDQNLLSLNHTEQQWDKHQ
USA300_FPR3757 ---SFT------------------------------------------------------
**.
COL ------------------------------------------------------------
N315 YPFKEWNQDQNLNSSMKYSVNWYYENLNKHLRQDEVKSYLDLIEYGNEEISGNENYWNES
USA300_FPR3757 ------------------------------------------------------------
COL ------------------------------------------------------------
N315 SLKISAIEQVNLLKNMKQHNMHFDNKAIEKVENSMTLKQKDTYKYVGKTGTGIVNHKEAN
USA300_FPR3757 ------------------------------------------------------------
COL ---------------------------------------------
N315 GWFVGYVETKDNTYYFATHLKGEDNANGEKAQQISERILKEMELI
USA300_FPR3757 ---------------------------------------------