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⊟Summary[edit | edit source]
- pan ID?: SAUPAN000148000
- symbol?: —
- synonym:
- description?: membrane spanning protein
- strand?: +
- coordinates?: 192394..1034490
- synteny block?: BlockID0001180
- occurrence?: in 88% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0092
08BA02176:
C248_0084
11819-97:
MS7_0085
6850:
RSAU_000041
71193:
ST398NM01_0108
ECT-R 2:
ECTR2_49
ED133:
SAOV_0044
ED98:
SAAV_0040
HO 5096 0412:
SAEMRSA15_00620
JH1:
SaurJH1_0082
JH9:
SaurJH9_0079
JKD6008:
SAA6008_00077
JKD6159:
SAA6159_00074
LGA251:
—
M013:
—
MRSA252:
SAR0102
MSHR1132:
SAMSHR1132_00690
MSSA476:
SAS0067
Mu3:
SAHV_0091
Mu50:
SAV0092
MW2:
MW0067
RF122:
—
ST398:
SAPIG0108
T0131:
—
TCH60:
HMPREF0772_10399
TW20:
SATW20_01110
USA300_TCH1516:
USA300HOU_0105
VC40:
SAVC_00210
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL ---MLISLVIPVFALLVIGGIIWMIIEGIVHISKKNKAIDNFFNQVNKVSETYKFATTFL
N315 MNDMLISLVIPVFALLVIGGIIWVIIEGIVHISKKNKAIDNFLNQVNKVSETYKFATAFL
NCTC8325 ---MLISLVIPVFALLVIGGIIWMIIEGIVHISKKNKAIDNFFNQVNKVSETYKFATTFL
Newman ---MLISLVIPVFALLVIGGIIWMIIEGIVHISKKNKAIDNFFNQVNKVSETYKFATTFL
USA300_FPR3757 ---MLISLVIPVFALLVIGGIIWMIIEGIVHISKKNKAIDNFFNQVNKVSETYKFATTFL
********************:******************:**************:**
COL FLILATAGISQFYLYYIVSAFLFWLVILTFGIAGIIFLMPYGLCFLPFYKQKKKKQTFKK
N315 FLILATAGISQFYLYYIVSAFLFWLVILTFGIAGIIFLMPYGLCFLPLYKQKKKKQTFKK
NCTC8325 FLILATAGISQFYLYYIVSAFLFWLVILTFGIAGIIFLMPYGLCFLPFYKQKKKKQTFKK
Newman FLILATAGISQFYLYYIVSAFLFWLVILTFGIAGIIFLMPYGLCFLPFYKQKKKKQTFKK
USA300_FPR3757 FLILATAGISQFYLYYIVSAFLFWLVILTFGIAGIIFLMPYGLCFLPFYKQKKKKQTFKK
***********************************************:************
COL YMVYTTIGLSICLGLSLVLVHTTKIYMDEGGVRYYYGSFVMKQAGGYAYLALAVLSTLLI
N315 YMVYTTIGLSICLGLSLVLVHTTKIYMDEGGVRYYYGSFVMKQAGGYAYLALAVLSTLLI
NCTC8325 YMVYTTIGLSICLGLSLVLVHTTKIYMDEGGVRYYYGSFVMKQAGGYAYLALAVLSTLLI
Newman YMVYTTIGLSICLGLSLVLVHTTKIYMDEGGVRYYYGSFVMKQAGGYAYLALAVLSTLLI
USA300_FPR3757 YMVYTTIGLSICLGLSLVLVHTTKIYMDEGGVRYYYGSFVMKQAGGYAYLALAVLSTLLI
************************************************************
COL VAKKATNKNKEIETVDNTNITER
N315 VAKKATNKNKEIETVDNTNITER
NCTC8325 VAKKATNKNKEIETVDNTNITER
Newman VAKKATNKNKEIETVDNTNITER
USA300_FPR3757 VAKKATNKNKEIETVDNTNITER
***********************