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⊟Summary[edit | edit source]
- pan ID?: SAUPAN000861000
- symbol?: —
- synonym:
- description?: tandem-type lipoprotein
- tandem-type lipoprotein
- tandem lipoprotein
- Membrane lipoprotein
- putative lipoprotein
- staphylococcus tandem lipoproteins family protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1128177..1153528
- synteny block?: BlockID0004220
- occurrence?: in 58% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0100
08BA02176:
C248_0090
11819-97:
—
6850:
—
71193:
ST398NM01_2805
ECT-R 2:
ECTR2_57
ED133:
—
ED98:
SAAV_0068
HO 5096 0412:
SAEMRSA15_00690
JH1:
SaurJH1_0091
JH9:
SaurJH9_0088
JKD6008:
—
JKD6159:
—
LGA251:
—
M013:
M013TW_0089
MRSA252:
—
MSHR1132:
—
MSSA476:
—
Mu3:
SAHV_0099
Mu50:
SAV0100
MW2:
—
RF122:
—
ST398:
SAPIG0114
T0131:
—
TCH60:
—
TW20:
—
USA300_TCH1516:
USA300HOU_0112
VC40:
SAVC_00245
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKRLNKLVLYISFLILVISFTAGCGIGKEAEVKKSFEKTLSMYPIKNLEDLYDKEGYRDD
N315 MKRLNKLVLYISFLILVISFTAGCGMGKEAEIKKSFEKTLSMYPIKNLEDLYDKEGYRDD
NCTC8325 MKRLNKLVLYISFLILVISFTAGCGIGKEAEVKKSFEKTLSMYPIKNLEDLYDKEGYRDD
Newman MKRLNKLVLYISFLILVISFTAGCGIGKEAEVKKSFEKTLSMYPIKNLEDLYDKEGYRDD
USA300_FPR3757 MKRLNKLVLYISFLILVISFTAGCGIGKEAEVKKSFEKTLSMYPIKNLEDLYDKEGYRDD
*************************:*****:****************************
COL EFDKNDKGTWIIGSEMVVQPKGERMKSKGMVLYMNRNTKTTTGKYIVSETLHDEDGRPKS
N315 QFDKNDKGTWIINSEMVVQPKGERMKSKGMVLYMNRNTKTTTGKYIVSETLHDEDGRPKS
NCTC8325 EFDKNDKGTWIIGSEMVVQPKGERMKSKGMVLYMNRNTKTTTGKYIVSETLHDEDGRPKS
Newman EFDKNDKGTWIIGSEMVVQPKGERMKSKGMVLYMNRNTKTTTGKYIVSETLHDEDGRPKS
USA300_FPR3757 EFDKNDKGTWIIGSEMVVQPKGERMKSKGMVLYMNRNTKTTTGKYIVSETLHDEDGRPKS
:***********.***********************************************
COL KDKEYPVKMVDNKIIPTKGIKDENIKKEIENFKFFAQYGSFKDLSKYKDGDISYNPEVPS
N315 KDKEYPVKMVDNKIIPTKGIKDENIKKEIENFKFFAQYGSFKDLSKYKDGDISYNPEVPS
NCTC8325 KDKEYPVKMVDNKIIPTKGIKDENIKKEIENFKFFAQYGSFKDLSKYKDGDISYNPEVPS
Newman KDKEYPVKMVDNKIIPTKGIKDENIKKEIENFKFFAQYGSFKDLSKYKDGDISYNPEVPS
USA300_FPR3757 KDKEYPVKMVDNKIIPTKGIKDENIKKEIENFKFFAQYGSFKDLSKYKDGDISYNPEVPS
************************************************************
COL YSAKYQLTNDDYNVKQLRKRYKIPTNKAPKLLLKGSGDLKGSSVGYKDIEFTFVEKKGEN
N315 YSAKYQLTNDDYNVKQLRKRYKIPTNKAPKLLLKGSGDLKGSSVGYKDIEFTFVEKKGEN
NCTC8325 YSAKYQLTNDDYNVKQLRKRYKIPTNKAPKLLLKGSGDLKGSSVGYKDIEFTFVEKKGEN
Newman YSAKYQLTNDDYNVKQLRKRYKIPTNKAPKLLLKGSGDLKGSSVGYKDIEFTFVEKKGEN
USA300_FPR3757 YSAKYQLTNDDYNVKQLRKRYKIPTNKAPKLLLKGSGDLKGSSVGYKDIEFTFVEKKGEN
************************************************************
COL TFFTDSLHLEPSEDK
N315 TFFTDSLHLEPSEDK
NCTC8325 TFFTDSLHLEPSEDK
Newman TFFTDSLHLEPSEDK
USA300_FPR3757 TFFTDSLHLEPSEDK
***************