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⊟Summary[edit | edit source]
- pan ID?: SAUPAN000894000
- symbol?: norC
- synonym:
- description?: MFS transporter
- MFS transporter
- drug transporter
- putative antibiotic resistance-related transmembrane efflux protein
- putative drug transporter
- antibiotic resistance-related transmembrane efflux protein
- drug transporter, putative
- major facilitator family transporter
- major facilitator superfamily protein
- major facilitator superfamily transporter
- major facilitator transporter
- MFS family major facilitator transporter
- multidrug resistance protein B
- putative transporter protein
- quinolone resistance protein norB
- transporter protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1159814..1161202
- synteny block?: BlockID0004330
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0103
08BA02176:
C248_0093
11819-97:
MS7_0097
6850:
RSAU_000060
71193:
ST398NM01_0117
ECT-R 2:
ECTR2_60
ED133:
SAOV_0053
ED98:
SAAV_0071
HO 5096 0412:
SAEMRSA15_00720
JH1:
SaurJH1_0094
JH9:
SaurJH9_0091
JKD6008:
SAA6008_00084
JKD6159:
SAA6159_00087
LGA251:
SARLGA251_00790 (norC)
M013:
M013TW_0093
MRSA252:
SAR0109
MSHR1132:
SAMSHR1132_00790
MSSA476:
SAS0080
Mu3:
SAHV_0102
Mu50:
SAV0103
MW2:
MW0079
RF122:
SAB0043
ST398:
SAPIG0117
T0131:
SAT0131_00086 (malA)
TCH60:
HMPREF0772_10391
TW20:
SATW20_01180 (norC)
USA300_TCH1516:
USA300HOU_0115
VC40:
SAVC_00260
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNETYRGGNKLILGIVLGVITFWLFAQSLVNVVPNLQQSFGTDMGTISIAVSLTALFSGM
N315 MNETYRGGNKLILGIVLGVITFWLFAQSLVNVVPNLQQSFGADMGTISIAVSLTALFSGM
NCTC8325 MNETYRGGNKLILGIVLGVITFWLFAQSLVNVVPNLQQSFGTDMGTISIAVSLTALFSGM
Newman MNETYRGGNKLILGIVLGVITFWLFAQSLVNVVPNLQQSFGTDMGTISIAVSLTALFSGM
USA300_FPR3757 MNETYRGGNKLILGIVLGVITFWLFAQSLVNVVPNLQQSFGTDMGTISIAVSLTALFSGM
*****************************************:******************
COL FVVGAGGLADKIGRVKMTNIGLLLSIIGSALIIITNLPALLILGRVIQGVSAACIMPSTL
N315 FVVGAGGLADKIGRVKMTNIGLLLSIIGSALIIITNLPALLILGRVIQGVSAACIMPSTL
NCTC8325 FVVGAGGLADKIGRVKMTNIGLLLSIIGSALIIITNLPALLILGRVIQGVSAACIMPSTL
Newman FVVGAGGLADKIGRVKMTNIGLLLSIIGSALIIITNLPALLILGRVIQGVSAACIMPSTL
USA300_FPR3757 FVVGAGGLADKIGRVKMTNIGLLLSIIGSALIIITNLPALLILGRVIQGVSAACIMPSTL
************************************************************
COL AIMKTYYQGAERQRALSYWSIGSWGGSGICSLFGGAVATTMGWRWIFIFSIIVAVLSMLL
N315 AIMKTYYQGAERQRALSYWSIGSWGGSGICSLFGGAVATTMGWRWIFIFSIIVAVLSMLL
NCTC8325 AIMKTYYQGAERQRALSYWSIGSWGGSGICSLFGGAVATTMGWRWIFIFSIIVAVLSMLL
Newman AIMKTYYQGAERQRALSYWSIGSWGGSGICSLFGGAVATTMGWRWIFIFSIIVAVLSMLL
USA300_FPR3757 AIMKTYYQGAERQRALSYWSIGSWGGSGICSLFGGAVATTMGWRWIFIFSIIVAVLSMLL
************************************************************
COL IKGTPETKSEITNTHKFDVAGLIVLVVMLLSLNVVITKGAALGYTSLWFFGLIAIVIVAF
N315 IKGTPETKSEITNTHKFDVAGLIVLVVMLLSLNVVITKGAALGYTSLWFFGLIAIVIVAF
NCTC8325 IKGTPETKSEITNTHKFDVAGLIVLVVMLLSLNVVITKGAALGYTSLWFFGLIAIVIVAF
Newman IKGTPETKSEITNTHKFDVAGLIVLVVMLLSLNVVITKGAALGYTSLWFFGLIAIVIVAF
USA300_FPR3757 IKGTPETKSEITNTHKFDVAGLIVLVVMLLSLNVVITKGAALGYTSLWFFGLIAIVIVAF
************************************************************
COL FIFLNVEKKVDNPLIDFKLFENKPYTGATISNFLLNGVAGTLIVANTFVQQGLGYTALQA
N315 FIFLNVEKKVDNPLIDFKLFENKPYTGATISNFLLNGVAGTLIVANTFVQQGLGYTALQA
NCTC8325 FIFLNVEKKVDNPLIDFKLFENKPYTGATISNFLLNGFAGTLIVANTFVQQGLGYTALQA
Newman FIFLNVEKKVDNPLIDFKLFENKPYTGATISNFLLNGVAGTLIVANTFVQQGLGYTALQA
USA300_FPR3757 FIFLNVEKKVDNPLIDFKLFENKPYTGATISNFLLNGVAGTLIVANTFVQQGLGYTALQA
*************************************.**********************
COL GYLSITYLIMVLLMIRVGEKLLQKMGSKRPMLLGTFIVVIGIALISLVFLPGIFYVISCV
N315 GYLSITYLIMVLLMIRVGEKLLQKMGSKRPMLLGTFIVVIGIALISLVFLPGIFYVISCV
NCTC8325 GYLSITYLIMVLLMIRVGEKLLQKMGSKRPMLLGTFIVVIGIALISLVFLPGIFYVISCV
Newman GYLSITYLIMVLLMIRVGEKLLQKMGSKRPMLLGTFIVVIGIALISLVFLPGIFYVISCV
USA300_FPR3757 GYLSITYLIMVLLMIRVGEKLLQKMGSKRPMLLGTFIVVIGIALISLVFLPGIFYVISCV
************************************************************
COL VGYLCFGLGLGIYATPSTDTAISNAPLDKVGVASGIYKMASSLGGAFGVAISGAVYAGAV
N315 VGYLCFGLGLGIYATPSTDTAISNAPLDKVGVASGIYKMASSLGGAFGVAISGAVYVGAV
NCTC8325 VGYLCFGLGLGIYATPSTDTAISNAPLDKVGVASGIYKMASSLGGAFGVAISGAVYAGAV
Newman VGYLCFGLGLGIYATPSTDTAISNAPLDKVGVASGIYKMASSLGGAFGVAISGAVYAGAV
USA300_FPR3757 VGYLCFGLGLGIYATPSTDTAISNAPLDKVGVASGIYKMASSLGGAFGVAISGAVYAGAV
********************************************************.***
COL AATSIHTGAMIALWVNVLMGIMAFIAILFAIPNDDKRVKDAK
N315 AATSIHTGAMIALWVNVLMGIMAFIAILFAIPNDDKRVKDAK
NCTC8325 AATSIHTGAMIALWVNVLMGIMAFIAILFAIPNDDKRVKDAK
Newman AATSIHTGAMIALWVNVLMGIMAFIAILFAIPNDDKRVKDAK
USA300_FPR3757 AATSIHTGAMIALWVNVLMGIMAFIAILFAIPNDDKRVKDAK
******************************************