PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN000912000
• symbol^?: sirB
• synonym:
• description^?: iron ABC transporter permease

  descriptions from strain specific annotations:

  • iron ABC transporter permease
  • iron compound ABC transporter permease SirB
  • iron compound ABC transporter, permease protein SirB
  • lipoprotein
  • lipoprotein SirB
  • siderophore compound ABC transporter permease SirB
  • staphyloferrin B ABC transporter permease subunit SirB
  • Siderophore staphylobactin ABC transporter, permease protein SirB
  • achromobactin transport system permease protein cbrB
  • fecCD transport family protein
  • iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane protein
  • iron (Fe3+) ABC transporter membrane protein
  • Iron compound ABC superfamily ATP binding cassette transporter, permease protein SirB
  • iron-enterobactin transporter membrane protein
  • lipoprotein, SirB
  • putative siderophore transport system permease
  • siderophore ABC transporter permease
  • siderophore transport protein
  • siderophore transport system permease
  • Staphylobactin transport system permease protein
  • transport system permease protein
• strand^?: -
• coordinates^?: 1180634..1181629
• synteny block^?: BlockID0004490
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL0098 (sirB)
N315:
SA0110 (sirB)
NCTC8325:
SAOUHSC_00072
Newman:
NWMN_0058 (sirB)
USA300_FPR3757:
SAUSA300_0116 (sirB)
04-02981:
SA2981_0115 (sirB)
08BA02176:
C248_0102 (sirB)
11819-97:
MS7_0106
6850:
RSAU_000068 (sirB)
71193:
ST398NM01_0125
ECT-R 2:
ECTR2_70
ED133:
SAOV_0061 (sirB)
ED98:
SAAV_0082 (sirB)
HO 5096 0412:
SAEMRSA15_00800 (sirB)
JH1:
SaurJH1_0105
JH9:
SaurJH9_0101
JKD6008:
SAA6008_00092 (sirB)
JKD6159:
SAA6159_00097 (sirB)
LGA251:
SARLGA251_00890 (sirB)
M013:
M013TW_0104
MRSA252:
SAR0117 (sirB)
MSHR1132:
SAMSHR1132_00900
MSSA476:
SAS0088
Mu3:
SAHV_0113 (sirB)
Mu50:
SAV0114 (sirB)
MW2:
MW0087 (sirB)
RF122:
SAB0053c (sirB)
ST398:
SAPIG0125
T0131:
SAT0131_00099 (mecA)
TCH60:
HMPREF0772_10383 (sirB)
TW20:
SATW20_01260 (sirB)
USA300_TCH1516:
USA300HOU_0125 (sirB)
VC40:
SAVC_00310

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MLLKPKYQIVIAGLCLAIVAILSLMIGNTLVSPGTVIQALFNFDSENDLHDVVTGARASR
  N315            MLLKPKYQIVIAGLCLAIVAILSLMIGNTLVSPGTVIQALFNFDSENDLHDVVTGARASR
  NCTC8325        MLLKPKYQIVIAGLCLAIVAILSLMIGNTLVSPGTVIQALFNFDSENDLHDVVTGARASR
  Newman          MLLKPKYQIVIAGLCLAIVAILSLMIGNTLVSPGTVIQALFNFDSENDLHDVVTGARASR
  USA300_FPR3757  MLLKPKYQIVIAGLCLAIVAILSLMIGNTLVSPGTVIQALFNFDSENDLHDVVTGARASR
                  ************************************************************
  
  COL             TIIALLTGAALAVSGLLMQALTRNPIASPGLFGVNAGAVFFVIFSITFIQIQSFKMIVVI
  N315            TIIALLTGAALAVSGLLMQALTRNPIASPGLFGVNAGAVFFVIFSITFIQIQSFKMIVVI
  NCTC8325        TIIALLTGAALAVSGLLMQALTRNPIASPGLFGVNAGAVFFVIFSITFIQIQSFKMIVVI
  Newman          TIIALLTGAALAVSGLLMQALTRNPIASPGLFGVNAGAVFFVIFSITFIQIQSFKMIVVI
  USA300_FPR3757  TIIALLTGAALAVSGLLMQALTRNPIASPGLFGVNAGAVFFVIFSITFIQIQSFKMIVVI
                  ************************************************************
  
  COL             AFLGAIVVTVLVVALGMFRQTLFSPHRVILAGAAIAMLFTAFTQGILIMNETDLQGLLFW
  N315            AFLGAIVVTILVVALGMFRQTLFSPHRVILAGAAIAMLFTAFTQGILIMNETDLQGLLFW
  NCTC8325        AFLGAIVVTVLVVALGMFRQTLFSPHRVILAGAAIAMLFTAFTQGILIMNETDLQGLLFW
  Newman          AFLGAIVVTVLVVALGMFRQTLFSPHRVILAGAAIAMLFTAFTQGILIMNETDLQGLLFW
  USA300_FPR3757  AFLGAIVVTVLVVALGMFRQTLFSPHRVILAGAAIAMLFTAFTQGILIMNETDLQGLLFW
                  *********:**************************************************
  
  COL             LSGSVSLRNIWDITWIIPLVLILILIAFSMAAHINILMTSDDIATGLGQNIKLIKWMIIM
  N315            LSGSVSLRNIWDIPWIIPLVLILILIAFSMAAHINILMTSDDIATGLGQNIKLIKWMIIM
  NCTC8325        LSGSVSLRNIWDIPWIIPLVLILILIAFSMAAHINILMTSDDIATGLGQNIKLIKWMIIM
  Newman          LSGSVSLRNIWDIPWIIPLVLILILIAFSMAAHINILMTSDDIATGLGQNIKLIKWMIIM
  USA300_FPR3757  LSGSVSLRNIWDIPWIIPLVLILILIAFSMAAHINILMTSDDIATGLGQNIKLIKWMIIM
                  *************.**********************************************
  
  COL             LISMLAGISVAVAGSIVFVGLIVPNISKRLLPPNYKYLIPFTALAGAILMIISDIVARII
  N315            LISMLAGISVAVAGSIVFVGLIVPNISKRLLPPNYKYLIPFTALAGAILMIISDIVARII
  NCTC8325        LISMLAGISVAVAGSIVFVGLIVPNISKRLLPPNYKYLIPFTALAGAILMIISDIVARII
  Newman          LISMLAGISVAVAGSIVFVGLIVPNISKRLLPPNYKYLIPFTALAGAILMIISDIVARII
  USA300_FPR3757  LISMLAGISVAVAGSIVFVGLIVPNISKRLLPPNYKYLIPFTALAGAILMIISDIVARII
                  ************************************************************
  
  COL             IKPLELPIGVVTAVIGAIVLIYIMKKGRQRL
  N315            IKPLELPIGVVTAVIGAIVLIYIMKKGRQRL
  NCTC8325        IKPLELPIGVVTAVIGAIVLIYIMKKGRQRL
  Newman          IKPLELPIGVVTAVIGAIVLIYIMKKGRQRL
  USA300_FPR3757  IKPLELPIGVVTAVIGAIVLIYIMKKGRQRL
                  *******************************