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⊟Summary[edit | edit source]
- pan ID?: SAUPAN000916000
- symbol?: sbnC
- synonym:
- description?: IucA/IucC family siderophore biosynthesis protein
- IucA/IucC family siderophore biosynthesis protein
- IucC family siderophore biosynthesis protein
- siderophore biosynthesis IucC family protein
- staphyloferrin B biosynthesis protein SbnC
- IucA/IucC family protein
- putative siderophore biosynthesis protein
- Siderophore biosynthesis IucC protein
- siderophore biosynthesis protein, IucC family
- Siderophore staphylobactin biosynthesis protein SbnC
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1184876..1186630
- synteny block?: BlockID0004530
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0119 (sbnC)
08BA02176:
C248_0106
11819-97:
MS7_0110
6850:
RSAU_000072 (sbnC)
71193:
ST398NM01_0129
ECT-R 2:
ECTR2_74
ED133:
SAOV_0065
ED98:
SAAV_0086
HO 5096 0412:
SAEMRSA15_00840
JH1:
SaurJH1_0109
JH9:
SaurJH9_0105
JKD6008:
SAA6008_00096 (sbnC)
JKD6159:
SAA6159_00101 (sbnC)
LGA251:
SARLGA251_00930 (sbnC)
M013:
M013TW_0108
MRSA252:
SAR0121
MSHR1132:
SAMSHR1132_00940
MSSA476:
SAS0092
Mu3:
SAHV_0117
Mu50:
SAV0118
MW2:
MW0091
RF122:
SAB0057
ST398:
SAPIG0129
T0131:
SAT0131_00104
TCH60:
HMPREF0772_10379 (sbnC)
TW20:
SATW20_01300 (sbnC)
USA300_TCH1516:
USA300HOU_0129
VC40:
SAVC_00330
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MQNHTAVNTAQAIILRDLVDALLFEDIAGIVSNSEITKENGQTLLIYERETQQIKIPVYF
N315 MQNHTAVNTAQAIILRDLVDALLFEDIAGIVSNSEITKENGQTLLIYERETQQIKIPVYF
NCTC8325 MQNHTAVNTAQAIILRDLVDALLFEDIAGIVSNSEITKENGQTLLIYERETQQIKIPVYF
Newman MQNHTAVNTAQAIILRDLVDALLFEDIAGIVSNSEITKENGQTLLIYERETQQIKIPVYF
USA300_FPR3757 MQNHTAVNTAQAIILRDLVDALLFEDIAGIVSNSEITKENGQTLLIYERETQQIKIPVYF
************************************************************
COL SALNMFRYESSQPITIEGRVSKQPLTAAEFWQTIANMNCDLSHEWEVARVEEGLTTAATQ
N315 SALNMFRYESSQPITIEGRVSKQPLTAAEFWQTIANMNCDLSHEWEVARVEEGLTTAATQ
NCTC8325 SALNMFRYESSQPITIEGRVSKQPLTAAEFWQTIANMNCDLSHEWEVARVEEGLTTAATQ
Newman SALNMFRYESSQPITIEGRVSKQPLTAAEFWQTIANMNCDLSHEWEVARVEEGLTTAATQ
USA300_FPR3757 SALNMFRYESSQPITIEGRVSKQPLTAAEFWQTIANMNCDLSHEWEVARVEEGLTTAATQ
************************************************************
COL LAKQLSELDLASHPFVMSEQFASLKDRPFHPLAKEKRGLREADYQVYQAELNQSFPLMVA
N315 LAKQLSELDLASHPFVMSEQFASLKDRPFHPLAKEKRGLREADYQVYQAELNQSFPLMVA
NCTC8325 LAKQLSELDLASHPFVMSEQFASLKDRPFHPLAKEKRGLREADYQVYQAELNQSFPLMVA
Newman LAKQLSELDLASHPFVMSEQFASLKDRPFHPLAKEKRGLREADYQVYQAELNQSFPLMVA
USA300_FPR3757 LAKQLSELDLASHPFVMSEQFASLKDRPFHPLAKEKRGLREADYQVYQAELNQSFPLMVA
************************************************************
COL AVKKTHMIHGDTANIDELENLTVPIKEQATDMLNDQGLSIDDYVLFPVHPWQYQHILPNV
N315 AVKKTHMIHGDTANIDELENLTVPIKEQATDMLNDQGLSIDDYVLFPVHPWQYQHILPNV
NCTC8325 AVKKTHMIHGDTANIDELENLTVPIKEQATDMLNDQGLSIDDYVLFPVHPWQYQHILPNV
Newman AVKKTHMIHGDTANIDELENLTVPIKEQATDMLNDQGLSIDDYVLFPVHPWQYQHILPNV
USA300_FPR3757 AVKKTHMIHGDTANIDELENLTVPIKEQATDMLNDQGLSIDDYVLFPVHPWQYQHILPNV
************************************************************
COL FAKEISEKLVVLLPLKFGDYLSSSSMRSLIDIGAPYNHVKVPFAMQSLGALRLTPTRYMK
N315 FATEISEKLVVLLPLKFGDYLSSSSMRSLIDIGAPYNHVKVPFAMQSLGALRLTPTRYMK
NCTC8325 FAKEISEKLVVLLPLKFGDYLSSSSMRSLIDIGAPYNHVKVPFAMQSLGALRLTPTRYMK
Newman FAKEISEKLVVLLPLKFGDYLSSSSMRSLIDIGAPYNHVKVPFAMQSLGALRLTPTRYMK
USA300_FPR3757 FAKEISEKLVVLLPLKFGDYLSSSSMRSLIDIGAPYNHVKVPFAMQSLGALRLTPTRYMK
**.*********************************************************
COL NGEQAEQLLRQLIEKDEALAKYVMVCDETAWWSYMGQDNDIFKDQLGHLTVQLRKYPEVL
N315 NGEQAEQLLRQLIEKDEALAKYVMVCDETAWWSYMGQDNDIFKDQLGHLTVQLRKYPEVL
NCTC8325 NGEQAEQLLRQLIEKDEALAKYVMVCDETAWWSYMGQDNDIFKDQLGHLTVQLRKYPEVL
Newman NGEQAEQLLRQLIEKDEALAKYVMVCDETAWWSYMGQDNDIFKDQLGHLTVQLRKYPEVL
USA300_FPR3757 NGEQAEQLLRQLIEKDEALAKYVMVCDETAWWSYMGQDNDIFKDQLGHLTVQLRKYPEVL
************************************************************
COL AKNDTQQLVSMAALAANDRTLYQMICGKDNISKNDVMTLFEDIAQVFLKVTLSFMQYGAL
N315 AKNDTQQLVSMAALAANDRTLYQMICGKDNISKNDVMTLFEDIAQVFLKVTLSFMQYGAL
NCTC8325 AKNDTQQLVSMAALAANDRTLYQMICGKDNISKNDVMTLFEDIAQVFLKVTLSFMQYGAL
Newman AKNDTQQLVSMAALAANDRTLYQMICGKDNISKNDVMTLFEDIAQVFLKVTLSFMQYGAL
USA300_FPR3757 AKNDTQQLVSMAALAANDRTLYQMICGKDNISKNDVMTLFEDIAQVFLKVTLSFMQYGAL
************************************************************
COL PELHGQNILLSFEDGRVQKCVLRDHDTVRIYKPWLTAHQLSLPKYVVREDTPNTLINEDL
N315 PELHGQNILLSFEDGRVQKCVLRDHDTVRIYKPWLTAHQLSLPKYVVREDTPNTLINEDL
NCTC8325 PELHGQNILLSFEDGRVQKCVLRDHDTVRIYKPWLTAHQLSLPKYVVREDTPNTLINEDL
Newman PELHGQNILLSFEDGRVQKCVLRDHDTVRIYKPWLTAHQLSLPKYVVREDTPNTLINEDL
USA300_FPR3757 PELHGQNILLSFEDGRVQKCVLRDHDTVRIYKPWLTAHQLSLPKYVVREDTPNTLINEDL
************************************************************
COL ETFFAYFQTLAVSVNLYAIIDAIQDLFGVSEHELMSLLKQILKNEVATISWVTTDQLAVR
N315 ETFFAYFQTLAVSVNLYAIIDAIQDLFGVSEHELMSLLKQILKNEVATISWVTTDQLAVR
NCTC8325 ETFFAYFQTLAVSVNLYAIIDAIQDLFGVSEHELMSLLKQILKNEVATISWVTTDQLAVR
Newman ETFFAYFQTLAVSVNLYAIIDAIQDLFGVSEHELMSLLKQILKNEVATISWVTTDQLAVR
USA300_FPR3757 ETFFAYFQTLAVSVNLYAIIDAIQDLFGVSEHELMSLLKQILKNEVATISWVTTDQLAVR
************************************************************
COL HILFDKQTWPFKQILLPLLYQRDSGGGSMPSGLTTVPNPMVTYD
N315 HILFDKQTWPFKQILLPLLYQRDSGGGSMPSGLTTVPNPMVTYD
NCTC8325 HILFDKQTWPFKQILLPLLYQRDSGGGSMPSGLTTVPNPMVTYD
Newman HILFDKQTWPFKQILLPLLYQRDSGGGSMPSGLTTVPNPMVTYD
USA300_FPR3757 HILFDKQTWPFKQILLPLLYQRDSGGGSMPSGLTTVPNPMVTYD
********************************************