PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN000939000
• symbol^?: —
• synonym:
• description^?: glycosyltransferase family 1 protein

  descriptions from strain specific annotations:

  • glycosyltransferase family 1 protein
  • glycosyl transferase, group 1 family protein
  • capsular glycosyltransferase, putative
  • glycosyltransferase family 4 protein
  • Exopolysaccharide biosynthesis glycosyltransferase EpsF
  • galactosyl transferase
  • beta-D-Glcp alpha-1,6-galactosyltransferase
  • capsular glycosyltransferase
  • glycoside hydrolase family protein
  • glycosyl transferases group 1 family protein
  • group 1 glycosyl transferase
• strand^?: +
• coordinates^?: 1199338..1200394
• synteny block^?: BlockID0004750
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL0115
N315:
SA0125
NCTC8325:
SAOUHSC_00090
Newman:
NWMN_0074
USA300_FPR3757:
SAUSA300_0132
04-02981:
SA2981_0131
08BA02176:
C248_0119
11819-97:
MS7_0121
6850:
RSAU_000084 (capH2)
71193:
ST398NM01_0144
ECT-R 2:
ECTR2_86
ED133:
SAOV_0078
ED98:
SAAV_0098
HO 5096 0412:
SAEMRSA15_00970
JH1:
SaurJH1_0121
JH9:
SaurJH9_0116
JKD6008:
SAA6008_00108
JKD6159:
SAA6159_00113
LGA251:
SARLGA251_01050
M013:
M013TW_0120
MRSA252:
SAR0132
MSHR1132:
SAMSHR1132_01060
MSSA476:
SAS0104
Mu3:
SAHV_0129
Mu50:
SAV0130
MW2:
MW0104
RF122:
SAB0069 (cap8H)
ST398:
SAPIG0144
T0131:
SAT0131_00118 (xseA)
TCH60:
HMPREF0772_10368 (cap8H2)
TW20:
SATW20_01410
USA300_TCH1516:
USA300HOU_0142
VC40:
SAVC_00390

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MKIIYCITKADNGGAQTHLIQLANHFCVHNDVYVIVGNHGPMIEQLDARVNVIIIEHLVG
  N315            MKIIYCITKADNGGAQTHLIQLANHFCVHHDVYVIVGNHGPMIEQLDARVNVIILEHLVG
  NCTC8325        MKIIYCITKADNGGAQTHLIQLANHFCVHNDVYVIVGNHGPMIEQLDARVNVIIIEHLVG
  Newman          MKIIYCITKADNGGAQTHLIQLANHFCVHNDVYVIVGNHGPMIEQLDARVNVIIIEHLVG
  USA300_FPR3757  MKIIYCITKADNGGAQTHLIQLANHFCVHNDVYVIVGNHGPMIEQLDARVNVIIIEHLVG
                  *****************************:************************:*****
  
  COL             PIDFKQDILAVKVLAQLFSKIKPDVIHLHSSKAGTVGRIAKFISKSKDTRIVFTAHGWAF
  N315            PIDFKQDILAVKVLAQLFSKIKPDVIHLHSSKAGTVGRIAKFISKSKDTRVVFTAHGWAF
  NCTC8325        PIDFKQDILAVKVLAQLFSKIKPDVIHLHSSKAGTVGRIAKFISKSKDTRIVFTAHGWAF
  Newman          PIDFKQDILAVKVLAQLFSKIKPDVIHLHSSKAGTVGRIAKFISKSKDTRIVFTAHGWAF
  USA300_FPR3757  PIDFKQDILAVKVLAQLFSKIKPDVIHLHSSKAGTVGRIAKFISKSKDTRIVFTAHGWAF
                  **************************************************:*********
  
  COL             TEGVKPAKKFLYLVIEKLMSLITDSIICVSDFDKQLALKYRFNRLKLTTIHNGIADVPAV
  N315            TEGVKPAKKFLYLVIEKLMSCITDSIICVSDFDKQLALKYRFNRLKLTTIHNGIADVPAV
  NCTC8325        TEGVKPAKKFLYLVIEKLMSLITDSIICVSDFDKQLALKYRFNRLKLTTIHNGIADVPAV
  Newman          TEGVKPAKKFLYLVIEKLMSLITDSIICVSDFDKQLALKYRFNRLKLTTIHNGIADVPAV
  USA300_FPR3757  TEGVKPAKKFLYLVIEKLMSLITDSIICVSDFDKQLALKYRFNRLKLTTIHNGIADVPAV
                  ******************** ***************************************
  
  COL             KQTLKSQSHNNIGEVVGMLPNKQDLQINAPTKHQFVMIARFAYPKLPQNLIAAIEILKLH
  N315            KQTLKSQSHNNIGEVVGMLPNKQDLQINAPTKHQFVMIARFAYPKLPQNLIAAIEILKLH
  NCTC8325        KQTLKSQSHNNIGEVVGMLPNKQDLQINAPTKHQFVMIARFAYPKLPQNLIAAIEILKLH
  Newman          KQTLKSQSHNNIGEVVGMLPNKQDLQINAPTKHQFVMIARFAYPKLPQNLIAAIEILKLH
  USA300_FPR3757  KQTLKSQSHNNIGEVVGMLPNKQDLQINAPTKHQFVMIARFAYPKLPQNLIAAIEILKLH
                  ************************************************************
  
  COL             NSNHAHFTFIGDGPTLNDCQQQVVQAGLENDVTFLGNVINASHLLSQYDTFILISKHEGL
  N315            NSNHAHFTFIGDGPTLNDCQQQVVQAGLENDVTFLGNVINASHLLSQYDTFILISKHEGL
  NCTC8325        NSNHAHFTFIGDGPTLNDCQQQVVQAGLENDVTFLGNVINASHLLSQYDTFILISKHEGL
  Newman          NSNHAHFTFIGDGPTLNDCQQQVVQAGLENDVTFLGNVINASHLLSQYDTFILISKHEGL
  USA300_FPR3757  NSNHAHFTFIGDGPTLNDCQQQVVQAGLENEVTFLGNVINASHLLSQYDTFILISKHEGL
                  ******************************:*****************************
  
  COL             PISIIEAMATGLPVIASHVGGISELVADNGICMMNNQPETIAKVLEKYLIDSDYIKMSNQ
  N315            PISIIEAMATGLPVIASHVGGISELVADNGICMMNNQPETIAKVLEKYLIDSDYIKMSNQ
  NCTC8325        PISIIEAMATGLPVIASHVGGISELVADNGICMMNNQPETIAKVLEKYLIDSDYIKMSNQ
  Newman          PISIIEAMATGLPVIASHVGGISELVADNGICMMNNQPETIAKVLEKYLIDSDYIKMSNQ
  USA300_FPR3757  PISIIEAMATGLPVIASHVGGISELVADNGICMMNNQPETIAKVLEKYLIDSDYIKMSNQ
                  ************************************************************
  
  COL             SRKRYLECFTEEKMIKEVEDVYNGKSTQ
  N315            SRKRYLECFTEEKMIKEVEDVYNGKSTQ
  NCTC8325        SRKRYLECFTEEKMIKEVEDVYNGKSTQ
  Newman          SRKRYLECFTEEKMIKEVEDVYNGKSTQ
  USA300_FPR3757  SRKRYLECFTEEKMIKEVEDVYNGKSTQ
                  ****************************