PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN000981000
• symbol^?: capG
• synonym:
• description^?: UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)

  descriptions from strain specific annotations:

  • UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
  • UDP-N-acetylglucosamine 2-epimerase
  • capsular polysaccharide biosynthesis protein Cap5G
  • capsular polysaccharide synthesis enzyme CapG
  • capsular polysaccharide synthesis protein Cap5G
  • UDP-N-acetylglucosamine 2-epimerase Cap5G
  • capsular polysaccharide synthesis enzyme Cap5G
  • capsular polysaccharide synthesis enzyme Cap8G
  • pseudogene
  • UDP-2-acetamido-2,6-dideoxy-beta-L-talose 2-epimerase
  • UDP-N-acetylglucosamine 2-epimerase CapG
  • uridine diphosphate-N-acetylglucosamine-2prime-epimerase
• strand^?: +
• coordinates^?: 1236748..1237872
• synteny block^?: BlockID0005150
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL0142 (cap5G)
N315:
SA0150 (capG)
NCTC8325:
SAOUHSC_00120
Newman:
NWMN_0101 (capG)
USA300_FPR3757:
SAUSA300_0158 (cap5G)
04-02981:
SA2981_0156 (capG)
08BA02176:
C248_0144 (capG)
11819-97:
MS7_0149
6850:
RSAU_000109 (capG)
71193:
ST398NM01_0169
ECT-R 2:
ECTR2_112
ED133:
SAOV_0102
ED98:
SAAV_0123 (cap5G)
HO 5096 0412:
SAEMRSA15_01210 (capG)
JH1:
SaurJH1_0146
JH9:
SaurJH9_0141
JKD6008:
SAA6008_00133 (cap5G)
JKD6159:
SAA6159_00139 (cap5G)
LGA251:
SARLGA251_01290 (capG)
M013:
M013TW_0145
MRSA252:
SAR0157 (capG)
MSHR1132:
SAMSHR1132_01290
MSSA476:
SAS0130
Mu3:
SAHV_0154 (capG)
Mu50:
SAV0155 (capG)
MW2:
MW0130 (cap8G)
RF122:
SAB0096 (capG)
ST398:
SAPIG0169
T0131:
SAT0131_00145
TCH60:
HMPREF0772_10343 (capG)
TW20:
SATW20_01660 (capG)
USA300_TCH1516:
USA300HOU_0169 (cap5G)
VC40:
SAVC_00545

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MEKLKLMTIVGTRPEIIRLSSTIKACDQYFNQILVHTGQNYDYTLNQIFFDDLELRQPDH
  N315            MEKLKLMTIVGTRPEIIRLSSTIKACDQYFNQILVHTGQNYDYTLNQIFFDDLELRQPDH
  NCTC8325        MEKLKLMTIVGTRPEIIRLSSTIKACDQYFNQILVHTGQNYDYTLNQIFFDDLELRQPDH
  Newman          MEKLKLMTIVGTRPEIIRLSSTIKACDQYFNQILVHTGQNYDYTLNQIFFDDLELRQPDH
  USA300_FPR3757  MEKLKLMTIVGTRPEIIRLSSTIKACDQYFNQILVHTGQNYDYTLNQIFFDDLELRQPDH
                  ************************************************************
  
  COL             YLEAVGSNLGETMGNIIAKTYDVLLREQPDALLILGDTNSCLAAVSAKRLKIPVFHMEAG
  N315            YLEAVGSNLGETMGNIIAKTYDVLLREQPDALLILGDTNSCLAAVSAKRLKIPVFHMEAG
  NCTC8325        YLEAVGSNLGETMGNIIAKTYDVLLREQPDALLILGDTNSCLAAVSAKRLKIPVFHMEAG
  Newman          YLEAVGSNLGETMGNIIAKTYDVLLREQPDALLILGDTNSCLAAVSAKRLKIPVFHMEAG
  USA300_FPR3757  YLEAVGSNLGETMGNIIAKTYDVLLREQPDALLILGDTNSCLAAVSAKRLKIPVFHMEAG
                  ************************************************************
  
  COL             NRCFDQNVPEEINRKIVDHVSDVNLPYTEHSRRYLLDEGFNKANIFVTGSPMTEVIEAHR
  N315            NRCFDQNVPEEINRKIVDHVSDVNLPYTEHSRRYLLDEGFNKANIFVTGSPMTEVIEAHR
  NCTC8325        NRCFDQNVPEEINRKIVDHVSDVNLPYTEHSRRYLLDEGFNKANIFVTGSPMTEVIEAHR
  Newman          NRCFDQNVPEEINRKIVDHVSDVNLPYTEHSRRYLLDEGFNKANIFVTGSPMTEVIEAHR
  USA300_FPR3757  NRCFDQNVPEEINRKIVDHVSDVNLPYTEHSRRYLLDEGLNKANIFVTGSPMTEVIEAHR
                  ***************************************:********************
  
  COL             DKINHSDVLNKLGLEPQQYILVSAHREENIDNEKNFKSLMNAINDIAKKYKMPVIYSTHP
  N315            DKINHSDVLNKLGLEPQQYILVSAHREENIDNEKNFKSLMNAINDIAKKYKMPVIYSTHP
  NCTC8325        DKINHSDVLNKLGLEPQQYILVSAHREENIDNEKNFKSLMNAINDIAKKYKMPVIYSTHP
  Newman          DKINHSDVLNKLGLEPQQYILVSAHREENIDNEKNFKSLMNAINDIAKKYKMPVIYSTHP
  USA300_FPR3757  DKINHSDVLNKLGLEPQQYILVSAHREENIDNEKNFKSLMNAINDIAKKYKMPVIYSTHP
                  ************************************************************
  
  COL             RSWKKIEESKFEFDPLVKQLKPFGFFDYNALQKDAFVVLSDSGTLSEESSILKFPGVLIR
  N315            RSWKKIEESKFEFDPLVKQLKPFGFFDYNALQKDAFVVLSDSGTLSEESSILKFPGVLIR
  NCTC8325        RSWKKIEESKFEFDPLVKQLKPFGFFDYNALQKDAFVVLSDSGTLSEESSILKFPGVLIR
  Newman          RSWKKIEESKFEFDPLVKQLKPFGFFDYNALQKDAFVVLSDSGTLSEESSILKFPGVLIR
  USA300_FPR3757  RSWKKIEESKFEFDPLVKQLKPFGFFDYNALQKDAFVVLSDSGTLSEESSILKFPGVLIR
                  ************************************************************
  
  COL             TSTERPEVLDKGTVIVGGITYNNLIQSVELAREMQNNNEPMIDAIDYKDTNVSTKVVKII
  N315            TSTERPEVLDKGTVIVGGITYNNLIQSVELAREMQNNNEPMIDAIDYKDTNVSTKVVKII
  NCTC8325        TSTERPEVLDKGTVIVGGITYNNLIQSVELAREMQNNNEPMIDAIDYKDTNVSTKVVKII
  Newman          TSTERPEVLDKGTVIVGGITYNNLIQSVELAREMQNNNEPMIDAIDYKDTNVSTKVVKII
  USA300_FPR3757  TSTERPEVLDKGTVIVGGITYNNLIQSVELAREMQNNNEPMIDAIDYKDTNVSTKVVKII
                  ************************************************************
  
  COL             QSYKDIINRNTWRK
  N315            QSYKDIINRNTWRK
  NCTC8325        QSYKDIINRNTWRK
  Newman          QSYKDIINRNTWRK
  USA300_FPR3757  QSYKDIINRNTWRK
                  **************