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⊟Summary[edit | edit source]
- pan ID?: SAUPAN000991000
- symbol?: capM
- synonym:
- description?: sugar transferase
- sugar transferase
- capsular polysaccharide biosynthesis galactosyltransferase Cap5M
- capsular polysaccharide biosynthesis protein Cap5M
- capsular polysaccharide biosynthesis protein Cap8M
- capsular polysaccharide biosynthesis protein CapM
- capsular polysaccharide synthesis galactosyltransferase CapM
- capsular polysaccharide synthesis protein Cap5M
- capsular polysaccharide synthesis enzyme Cap5M
- bacterial sugar transferase family protein
- capsular polysaccharide biosynthesis galactosyltransferase CapM
- capsular polysaccharide synthesis enzyme Cap8M
- capsular polysaccharide synthesis enzyme CapM
- glucosyltransferase EpsB domain protein
- Undecaprenyl-phosphate beta-N-acetyl-D-fucosaminephosphotransferase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1260411..1260968
- synteny block?: BlockID0005240
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0162 (capM)
08BA02176:
C248_0150 (capM)
11819-97:
MS7_0155
6850:
RSAU_000115 (capM1)
71193:
ST398NM01_0175
ECT-R 2:
ECTR2_118
ED133:
SAOV_0108
ED98:
SAAV_0129 (cap5M)
HO 5096 0412:
SAEMRSA15_01270 (capM)
JH1:
SaurJH1_0152
JH9:
SaurJH9_0147
JKD6008:
SAA6008_00139 (cap5M)
JKD6159:
SAA6159_00145 (cap5M)
LGA251:
SARLGA251_01350 (capM)
M013:
M013TW_0151
MRSA252:
SAR0163 (capM)
MSHR1132:
SAMSHR1132_01350
MSSA476:
SAS0136
Mu3:
SAHV_0160 (capM)
Mu50:
SAV0161 (capM)
MW2:
MW0136 (cap8M)
RF122:
SAB0102 (capM)
ST398:
SAPIG0175
T0131:
SAT0131_00152 (pbpC)
TCH60:
HMPREF0772_10337 (cap5M)
TW20:
SATW20_01720 (capM)
USA300_TCH1516:
USA300HOU_0175 (cap5M)
VC40:
SAVC_00575
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI
N315 MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI
NCTC8325 MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI
Newman MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI
USA300_FPR3757 MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI
************************************************************
COL DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK
N315 DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK
NCTC8325 DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK
Newman DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK
USA300_FPR3757 DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK
************************************************************
COL RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS
N315 RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS
NCTC8325 RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS
Newman RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS
USA300_FPR3757 RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS
************************************************************
COL EGVHH
N315 EGVHH
NCTC8325 EGVHH
Newman EGVHH
USA300_FPR3757 EGVHH
*****