Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN001011000
- symbol?: ssuA
- synonym:
- description?: putative lipoprotein
- putative lipoprotein
- ABC transporter substrate-binding protein
- ABC superfamily ABC superfamily ATP binding cassette transporter, binding protein
- ABC superfamily ATP-binding cassette transporter, binding protein
- ABC transporter ATP-binding protein
- ABC-type nitrate/sulfonate/bicarbonate transporter, TauA
- lipoprotein, putative
- NLPA lipoprotein
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1276271..1278011
- synteny block?: BlockID0005390
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0174
08BA02176:
C248_0162
11819-97:
MS7_0166
6850:
RSAU_000126
71193:
ST398NM01_0187
ECT-R 2:
ECTR2_136
ED133:
SAOV_0119
ED98:
SAAV_0140
HO 5096 0412:
SAEMRSA15_01380
JH1:
SaurJH1_0163
JH9:
SaurJH9_0158
JKD6008:
SAA6008_00150 (tauA)
JKD6159:
SAA6159_00156 (tauA)
LGA251:
SARLGA251_01460
M013:
M013TW_0162
MRSA252:
SAR0174
MSHR1132:
SAMSHR1132_01460
MSSA476:
SAS0148
Mu3:
SAHV_0172
Mu50:
SAV0173
MW2:
MW0147
RF122:
SAB0113
ST398:
SAPIG0187
T0131:
SAT0131_00163
TCH60:
HMPREF0772_10326
TW20:
SATW20_01830
USA300_TCH1516:
USA300HOU_0186
VC40:
SAVC_00630
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
N315 MKRLSIIVIIGIFIITGCDWQRTSKEPSKNAQNQQVIKIGYLPITHSANLMMTKKLLSQY
NCTC8325 MKRLSIIVIIGIFIITGCDWQRTSKERSKNAQNQQVIKIGYLPITHSANLMMTKKLLSQY
Newman MKRLSIIVIIGIFIITGCDWQRTSKERSKNAQNQQVIKIGYLPITHSANLMMTKKLLSQY
USA300_FPR3757 MKRLSIIVIIGIFIITGCDWQRTSKERSKNAQNQQVIKIGYLPITHSANLMMTKKLLSQY
************************** *********************************
N315 NHPKYKLELVKFNNWPDLMDALNSGRIDGASTLIELAMKSKQKGSNIKAVALGHHEGNVI
NCTC8325 NHPKYKLELVKFNNWPDLMDALNSGRIDGASTLIELAMKSKQKGSNIKAVALGHHEGNVI
Newman NHPKYKLELVKFNNWPDLMDALNSGRIDGASTLIELAMKSKQKGSNIKAVALGHHEGNVI
USA300_FPR3757 NHPKYKLELVKFNNWPDLMDALNSGRIDGASTLIELAMKSKQKGSNIKAVALGHHEGNVI
************************************************************
N315 MGQKGMHLNEF-NNGDDYHFGIPHRYSTHYLLLEELRKQLKIKPGHFSYHEMSPAEMPAA
NCTC8325 MGQKGMHLNEFNNNGDDYHFGIPHRYSTHYLLLEELRKQLKIKPGHFSYHEMSPAEMPAA
Newman MGQKGMHLNEFNNNGDDYHFGIPHRYSTHYLLLEELRKQLKIKPGHFSYHEMSPAEMPAA
USA300_FPR3757 MGQKGMHLNEFNNNGDDYHFGIPHRYSTHYLLLEELRKQLKIKPGHFSYHEMSPAEMPAA
*********** ************************************************
N315 LSEHRITGYSVAEPFGALGEKLGKGKTLKHGDDVIPDAYCCVLVLRGELLDQHKDVAQAF
NCTC8325 LSEHRITGYSVAEPFGALGEKLGKGKTLKHGDDVIPDAYCCVLVLRGELLDQHKDVAQAF
Newman LSEHRITGYSVAEPFGALGEKLGKGKTLKHGDDVIPDAYCCVLVLRGELLDQHKDVAQAF
USA300_FPR3757 LSEHRITGYSVAEPFGALGEKLGKGKTLKHGDDVIPDAYCCVLVLRGELLDQHKDVAQAF
************************************************************
N315 VQDYKKSGFKMNDRKQSVDIMTHHFKQSRDVLTQSAAWTSYGDLTIKPSGYQEITTLVKQ
NCTC8325 VQDYKKSGFKMNDRKQSVDIMTHHFKQSRDVLTQSAAWTSYGDLTIKPSGYQEITTLVKQ
Newman VQDYKKSGFKMNDRKQSVDIMTHHFKQSRDVLTQSAAWTSYGDLTIKPSGYQEITTLVKQ
USA300_FPR3757 VQDYKKSGFKMNDRKQSVDIMTHHFKQSRDVLTQSAAWTSYGDLTIKPSGYQEITTLVKQ
************************************************************
N315 HHLFNPPAYDDFVEPSLYKEASRS
NCTC8325 HHLFNPPAYDDFVEPSLYKEASRS
Newman HHLFNPPAYDDFVEPSLYKEASRS
USA300_FPR3757 HHLFNPPAYDDFVEPSLYKEASRS
************************