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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001042000
- symbol?: —
- synonym:
- description?: sce7726 family protein
- sce7726 family protein
- SepS16A
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1317543..1318781
- synteny block?: BlockID0005690
- occurrence?: in 64% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
—
08BA02176:
C248_0188
11819-97:
MS7_0188
6850:
RSAU_000148
71193:
ST398NM01_0214
ECT-R 2:
—
ED133:
SAOV_0141
ED98:
—
HO 5096 0412:
SAEMRSA15_01610
JH1:
—
JH9:
—
JKD6008:
SAA6008_00174
JKD6159:
SAA6159_00177
LGA251:
SARLGA251_01670
M013:
M013TW_0184
MRSA252:
SAR0197
MSHR1132:
—
MSSA476:
—
Mu3:
—
Mu50:
—
MW2:
—
RF122:
—
ST398:
SAPIG0214
T0131:
SAT0131_00190
TCH60:
HMPREF0772_10302
TW20:
SATW20_02060
USA300_TCH1516:
USA300HOU_0209
VC40:
SAVC_00750
⊟Genome Viewer[edit | edit source]
| COL | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MDNRNMINRVFSQKILHQIAIKNKSDVVDEAYDFYIQGPKNINVIQKMKSLYNYLKKSYR
NCTC8325 MDNRNMINRVFSQKILHQIAIKNKSDVVDEAYDFYIQGPKNINVIQKMKSLYNYLKKSYR
Newman MDNRNMINRVFSQKILHQIAIKNKSDVVDEAYDFYIQGPKNINVIQKMKSLYNYLKKSYR
USA300_FPR3757 MDNRNMINRVFSQKILHQIAIKNKSDVVDEAYDFYIQGPKNINVIQKMKSLYNYLKKSYR
************************************************************
COL NEYFYKNTILNKLLLGRHSINTTTALSEMPIGKSIADFILLNGKGVVYEIKTELDKLDRL
NCTC8325 NEYFYKNTILNKLLLGRHSINTTTALSEMPIGKSIADFILLNGKGVVYEIKTELDKLDRL
Newman NEYFYKNTILNKLLLGRHSINTTTALSEMPIGKSIADFILLNGKGVVYEIKTELDKLDRL
USA300_FPR3757 NEYFYKNTILNKLLLGRHSINTTTALSEMPIGKSIADFILLNGKGVVYEIKTELDKLDRL
************************************************************
COL DNQINDYYEVFNYVVVITNDKHLNKVMARYKDTTVGILVLTTRNTLSEVQKPKENNSLLN
NCTC8325 DNQINDYYEVFNYVVVITNDKHLNKVMARYKDTTVGILVLTTRNTLSEVQKPKENNSLLN
Newman DNQINDYYEVFNYVVVITNDKHLNKVMARYKDTTVGILVLTTRNTLSEVQKPKENNSLLN
USA300_FPR3757 DNQINDYYEVFNYVVVITNDKHLNKVMARYKDTTVGILVLTTRNTLSEVQKPKENNSLLN
************************************************************
COL TKAMYNFLRKEERKRVIAQNHMDVPTYNDFTEYDVLFDVFKEIPMTKLHNNMISELKKRG
NCTC8325 TKAMYNFLRKEERKRVIAQNHMDVPTYNDFTEYDVLFDVFKEIPMTKLHNNMISELKKRG
Newman TKAMYNFLRKEERKRVIAQNHMDVPTYNDFTEYDVLFDVFKEIPMTKLHNNMISELKKRG
USA300_FPR3757 TKAMYNFLRKEERKRVIAQNHMDVPTYNDFTEYDVLFDVFKEIPMTKLHNNMISELKKRG
************************************************************
COL NMKEYKDEFLAAPAEIKFLLYFAKMTKKDKNKLYHFLKED
NCTC8325 NMKEYKDEFLAAPAEIKFLLYFAKMTKKDKNKLYHFLKED
Newman NMKEYKDEFLAAPAEIKFLLYFAKMTKKDKNKLYHFLKED
USA300_FPR3757 NMKEYKDEFLAAPAEIKFLLYFAKMTKKDKNKLYHFLKED
****************************************