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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001046000
- symbol?: —
- synonym:
- description?: RES domain-containing protein
- strand?: +
- coordinates?: 1320773..1329717
- synteny block?: BlockID0005720
- occurrence?: in 30% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
—
08BA02176:
—
11819-97:
MS7_0190
6850:
—
71193:
—
ECT-R 2:
—
ED133:
SAOV_0143
ED98:
—
HO 5096 0412:
—
JH1:
—
JH9:
—
JKD6008:
—
JKD6159:
SAA6159_00179
LGA251:
SARLGA251_01690
M013:
—
MRSA252:
—
MSHR1132:
—
MSSA476:
—
Mu3:
—
Mu50:
—
MW2:
—
RF122:
—
ST398:
—
T0131:
—
TCH60:
—
TW20:
—
USA300_TCH1516:
USA300HOU_0211
VC40:
SAVC_00760
⊟Genome Viewer[edit | edit source]
| COL | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKICEKCFNNTEIVEIIANDNSKFDNCDIDNNHLGVKIFDTTKDIDKLELIRDYLRPALE
NCTC8325 MKICEKCFNNTEIVEIIANDNSKFDNCDIDNNHLGVKIFDTTKDIDKLELIRDYLRPALE
Newman MKICEKCFNNTEIVEIIANDNSKFDNCDIDNNHLGVKIFDTTKDIDKLELIRDYLRPALE
USA300_FPR3757 MKICEKCFNNTEIVEIIANDNSKFDNCDIDNNHLGVKIFDTTKDIDKLELIRDYLRPALE
************************************************************
COL LYDISINLPDTFSPKEGKKIEIALKDDWSIFNVEEAQISCILNELFKDDENLDRRVLEDL
NCTC8325 LYDISINLPDTFSPKEGKKIEIALKDDWSIFNVEEAQISCILNELFKDDENLDRRVLEDL
Newman LYDISINLPDTFSPKEGKKIEIALKDDWSIFNVEEAQISCILNELFKDDENLDRRVLEDL
USA300_FPR3757 LYDISINLPDTFSPKEGKKIEIALKDDWSIFNVEEAQISCILNELFKDDENLDRRVLEDL
************************************************************
COL VGAKIINDKKYTNKNLIVANNDWDGFCESLKYKNRFHNNMINLENLAFFLDITTNYYSIE
NCTC8325 VGAKIINDKKYTNKNLIVANNDWDGFCESLKYKNRFHKNMINLENLAFFLDITTNYYSIE
Newman VGAKIINDKKYTNKNLIVANNDWDGFCESLKYKNRFHNNMINLENLAFFLDITTNYYSIE
USA300_FPR3757 VGAKIINDKKYTNKNLIVANNDWDGFCESLKYKNRFHNNMINLENLAFFLDITTNYYSIE
*************************************:**********************
COL EFRERFEPLYRSRIVKFITEKSELMSPPKGFATAGRLNSKWISVLYLSTKEQVSIEEVKP
NCTC8325 EFRERFEPLYRSRIVKFITEKSELMSPPKGFATAGRLNSKWISVLYLSTKEQVSIEEVKP
Newman EFRERFEPLYRSRIVKFITEKSELMSPPKGFATAGRLNSKWISVLYLSTKEQVSIEEVKP
USA300_FPR3757 EFRERFEPLYRSRIVKFITEKSELMSPPKGFATAGRLNSKWISVLYLSTKEQVSIEEVKP
************************************************************
COL KHNDIIYIGKVKLQKNVTKEKLKIANLTNLTSNAIKAGDDGFRKYFVNYQTLKKIHKGIT
NCTC8325 KHNDIIYIGKVKLQKNVTKEKLKIANLTNLTSNAIKAGDDGFRKYFVNYQTLKKIHKGIT
Newman KHNDIIYIGKVKLQKNVTKEKLKIANLTNLTSNAIKAGDDGFRKYFVNYQTLKKIHKGIT
USA300_FPR3757 KHNDIIYIGKVKLQKNVTKEKLKIANLTNLTSNAIKAGDDGFRKYFVNYQTLKKIHKGIT
************************************************************
COL NPSDEQGIDYLPFQYLADYIRSLKYDGIMYESILQDGTFNFVFFDQSLFECVNYERKRVS
NCTC8325 NPSDEQGIDYLPFQYLADYIRSLKYDGIMYESILQDGTFNFVFFDQSLFECVNYERKRVS
Newman NPSDEQGIDYLPFQYLADYIRSLKYDGIMYESILQDGTFNFVFFDQSLFECVNYERKRVS
USA300_FPR3757 NPSDEQGIDYLPFQYLADYIRSLKYDGIMYESILQDGTFNFVFFDQSLFECVNYERKRVS
************************************************************
COL DVKYTLTKLS
NCTC8325 DVKYTLTKLS
Newman DVKYTLTKLS
USA300_FPR3757 DVKYTLTKLS
**********