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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001058000
- symbol?: gisC
- synonym:
- description?: ABC transporter permease
- ABC transporter permease
- peptide ABC transporter permease
- oligopeptide ABC transporter
- oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein
- binding--dependent transport system inner membrane component family protein
- binding-protein-dependent transport system inner membrane component family protein
- binding-protein-dependent transport system inner membrane protein
- Dipeptide transport system permease protein DppC
- oligopeptide ABC transporter membrane protein
- Oligopeptide transport system permease protein
- putative dipeptide transport system permease protein DppC
- Putative glutathione transporter, permease component
- putative transport system permease
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1333007..1334179
- synteny block?: BlockID0005800
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0208
08BA02176:
C248_0191
11819-97:
MS7_0193
6850:
RSAU_000151
71193:
ST398NM01_0217
ECT-R 2:
ECTR2_168
ED133:
SAOV_0146
ED98:
SAAV_0173
HO 5096 0412:
SAEMRSA15_01660
JH1:
SaurJH1_0198
JH9:
SaurJH9_0192
JKD6008:
SAA6008_00177
JKD6159:
SAA6159_00182
LGA251:
SARLGA251_01720
M013:
M013TW_0187
MRSA252:
SAR0200
MSHR1132:
SAMSHR1132_01730
MSSA476:
SAS0183
Mu3:
SAHV_0206
Mu50:
SAV0207
MW2:
MW0183
RF122:
SAB0146
ST398:
SAPIG0217
T0131:
SAT0131_00193
TCH60:
HMPREF0772_10299
TW20:
SATW20_02090
USA300_TCH1516:
USA300HOU_0214
VC40:
SAVC_00775
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MAQLNSKIASLKLFASYAIATYILVILTSALNLFKGYVADTFYIAETLLIVLTIILIIIL
N315 MVKLTTKIASLKLFASYAIATYILVMLTSALNLFKGYVADTFYIAETLLIILTIILIIIL
NCTC8325 MAQLNSKIASLKLFASYAIATYILVILTSALNLFKGYVADTFYIAETLLIVLTIILIIIL
Newman MAQLNSKIASLKLFASYAIATYILVILTSALNLFKGYVADTFYIAETLLIVLTIILIIIL
USA300_FPR3757 MAQLNSKIASLKLFASYAIATYILVILTSALNLFKGYVADTFYIAETLLIVLTIILIIIL
*.:*.:*******************:************************:*********
COL TTEQTWKHHDLWRRIVEVLLLLMTLTGNVFTLLMFVSIRRYQRTSQIHSYNGWESFIRKT
N315 TTEQTWKHHDLWRRIVEVLLLLMALTGNVFTLLMFVSIRRYQRTSQIHSYNGWESFIRKT
NCTC8325 TTEQTWKHHDLWRRIVEVLLLLMTLTGNVFTLLMFVSIRRYQRTSQIHSYNGWESFIRKT
Newman TTEQTWKHHDLWRRIVEVLLLLMTLTGNVFTLLMFVSIRRYQRTSQIHSYNGWESFIRKT
USA300_FPR3757 TTEQTWKHHDLWRRIVEVLLLLMTLTGNVFTLLMFVSIRRYQRTSQIHSYNGWESFIRKT
***********************:************************************
COL TRHRIAIIGLLILVYMLTLSIVSQFTFDTTLATKNQFNALLHGPSLAYPFGTDDFGRDLF
N315 TRHRIAIIGLLILVYMLTLSIVSQFTFDTTLATKNQFNALLHGPSLAYPFGTDDFGRDLF
NCTC8325 TRHRIAIIGLLILVYMLTLSIVSQFTFDTTLATKNQFNALLHGPSLAYPFGTDDFGRDLF
Newman TRHRIAIIGLLILVYMLTLSIVSQFTFDTTLATKNQFNALLHGPSLAYPFGTDDFGRDLF
USA300_FPR3757 TRHRIAIIGLLILVYMLTLSIVSQFTFDTTLATKNQFNALLHGPSLAYPFGTDDFGRDLF
************************************************************
COL TRVVVGTKLTFSISIISVVIAVIFGVLLGTIAGYFNHIDNLIMRILDVVFAIPSLLLAVA
N315 TRVVVGTKLTFSISIISVVIAVIFGVLLGTIAGYFNHIDNLIMRILDVVFAIPSLLLAVA
NCTC8325 TRVVVGTKLTFSISIISVVIAVIFGVLLGTIAGYFNHIDNLIMRILDVVFAIPSLLLAVA
Newman TRVVVGTKLTFSISIISVVIAVIFGVLLGTIAGYFNHIDNLIMRILDVVFAIPSLLLAVA
USA300_FPR3757 TRVVVGTKLTFSISIISVVIAVIFGVLLGTIAGYFNHIDNLIMRILDVVFAIPSLLLAVA
************************************************************
COL IIASFGASIPNLIIALSIGNIPSFARTMRASVLEIKRMEYVDAARITGENTWNIIWRYIL
N315 IIASFGASIPNLIIALSIGNIPSFARTMRASVLEIKRMEYVDAARITGENTWNIIWRYIL
NCTC8325 IIASFGASIPNLIIALSIGNIPSFARTMRASVLEIKRMEYVDAARITGENTWNIIWRYIL
Newman IIASFGASIPNLIIALSIGNIPSFARTMRASVLEIKRMEYVDAARITGENTWNIIWRYIL
USA300_FPR3757 IIASFGASIPNLIIALSIGNIPSFARTMRASVLEIKRMEYVDAARITGENTWNIIWRYIL
************************************************************
COL PNAIAPMIVRFSLNIGVVVLTTSSLSFLGLGVAPDVAEWGNILRTGSNYLETHSNLAIVP
N315 PNAIAPMIVRFSLNIGVVVLTTSSLSFLGLGVAPDVAEWGNILRTGSNYLETHSNLAIVP
NCTC8325 PNAIAPMIVRFSLNIGVVVLTTSSLSFLGLGVAPDVAEWGNILRTGSNYLETHSNLAIVP
Newman PNAIAPMIVRFSLNIGVVVLTTSSLSFLGLGVAPDVAEWGNILRTGSNYLETHSNLAIVP
USA300_FPR3757 PNAIAPMIVRFSLNIGVVVLTTSSLSFLGLGVAPDVAEWGNILRTGSNYLETHSNLAIVP
************************************************************
COL GVCIMFVVLAFNFIGDAVRDALDPRIH
N315 GVCIMFVVLAFNFIGDAVRDALDPRIH
NCTC8325 GVCIMFVVLAFNFIGDAVRDALDPRIH
Newman GVCIMFVVLAFNFIGDAVRDALDPRIH
USA300_FPR3757 GVCIMFVVLAFNFIGDAVRDALDPRIH
***************************