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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001070000
- symbol?: —
- synonym:
- description?: Gfo/Idh/MocA family oxidoreductase
- Gfo/Idh/MocA family oxidoreductase
- putative NADH-dependent dehydrogenase
- NADH-dependent dehydrogenase
- oxidoreductase, Gfo/Idh/MocA family
- oxidoreductase , NAD-binding Rossmann fold family protein
- oxidoreductase domain-containing protein
- oxidoreductase family, NAD-binding Rossmann fold family protein
- putative oxidoreductase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1347156..1348196
- synteny block?: BlockID0005920
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0219
08BA02176:
C248_0202
11819-97:
MS7_0204
6850:
RSAU_000162
71193:
ST398NM01_0228
ECT-R 2:
ECTR2_179
ED133:
SAOV_0156
ED98:
SAAV_0184
HO 5096 0412:
SAEMRSA15_01770
JH1:
SaurJH1_0209
JH9:
SaurJH9_0203
JKD6008:
SAA6008_00187 (mviM)
JKD6159:
SAA6159_00193 (mviM)
LGA251:
SARLGA251_01820
M013:
M013TW_0198
MRSA252:
SAR0210
MSHR1132:
SAMSHR1132_01840
MSSA476:
SAS0194
Mu3:
SAHV_0217
Mu50:
SAV0218
MW2:
MW0194
RF122:
SAB0157
ST398:
SAPIG0228
T0131:
SAT0131_00204 (rpsT)
TCH60:
HMPREF0772_10289
TW20:
SATW20_02190
USA300_TCH1516:
USA300HOU_0225
VC40:
SAVC_00830
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTKLKVGVIGVGGIAQDRHIPALLKLKDTVSLVAVQDINTVQMIDVAKRFNIPHAVETPS
N315 MTKLKVGVIGVGGIAQDRHIPALLKLKDTVSLVAVQDINTVQMIDVAKRFNIPQAVETPS
NCTC8325 MTKLKVGVIGVGGIAQDRHIPALLKLKDTVSLVAVQDINTVQMIDVAKRFNIPHAVETPS
USA300_FPR3757 MTKLKVGVIGVGGIAQDRHIPALLKLKDTVSLVAVQDINTVQMIDVAKRFNIPHAVETPS
*****************************************************:******
COL ELFKLVDAVVICTPNKFHADLSIEALNHGVHVLCEKPMAMTTEECDRMIEAANKNHKLLT
N315 ELFKLVDAVVICTPNKFHADLSIEALNHGVHVLCEKPMAMTTEECDRMIEAANKNHKLLT
NCTC8325 ELFKLVDAVVICTPNKFHADLSIEALNHGVHVLCEKPMAMTTEECDRMIEAANKNHKLLT
USA300_FPR3757 ELFKLVDAVVICTPNKFHADLSIEALNHGVHVLCEKPMAMTTEECDRMIEAANKNHKLLT
************************************************************
COL VAYHYRHTDVAITAKKAIESGVVGKPLVARVQAMRRRKVPGWGVFTNKALQGGGSLIDYG
N315 VAYHYRHTDVAMTAKKAIEAGVVGKPLVARVQAMRRRKVPGWGVFTNKALQGGGSLIDYG
NCTC8325 VAYHYRHTDVAITAKKAIESGVVGKPLVARVQAMRRRKVPGWGVFTNKALQGGGSLIDYG
USA300_FPR3757 VAYHYRHTDVAITAKKAIESGVVGKPLVARVQAMRRRKVPGWGVFTNKALQGGGSLIDYG
***********:*******:****************************************
COL CHLLDLSLWLLGKDMVPHEVLGKTYNQLSKQPNQINDWGTFDHTKFDVDDHVTSYMTFAN
N315 CHLLDLSLWLLGKDMVPHEVLGKTYNQLSKQPNQINDWGTFDHTKFDVDDHVTSYMTFAN
NCTC8325 CHLLDLSLWLLGKDMVPHEVLGKTYNQLSKQPNQINDWGTFDHTKFDVDDHVTSYMTFAN
USA300_FPR3757 CHLLDLSLWLLGKDMVPHEVLGKTYNQLSKQPNQINDWGTFDHTKFDVDDHVTSYMTFAN
************************************************************
COL RASMQFECSWSANIKEDKVHVSLSGEDGGINLFPFEIYEPRFGTIFESKANVEHNEDIAG
N315 RASMQFECSWSANIKEDKVHVSLSGEDGGINLFPFEIYEPRFGTIFESKANVEHNEDIAG
NCTC8325 RASMQFECSWSANIKEDKVHVSLSGEDGGINLFPFEIYEPRFGTIFESKANVEHNEDIAG
USA300_FPR3757 RASMQFECSWSANIKEDKVHVSLSGEDGGINLFPFEIYEPRFGTIFESKANVEHNEDIAG
************************************************************
COL ERQARNFVNACLGIEEIVVKPEEARNVNALIEAIYRSDLDNKSIQL
N315 ERQARNFVNACLGIEEIVVKPEEARNVNALIEAIYRSDLDNKSIQL
NCTC8325 ERQARNFVNACLGIEEIVVKPEEARNVNALIEAIYRSDLDNKSIQL
USA300_FPR3757 ERQARNFVNACLGIEEIVVKPEEARNVNALIEAIYRSDLDNKSIQL
**********************************************