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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001086000
- symbol?: —
- synonym:
- description?: glycerophosphoryl diester phosphodiesterase
- glycerophosphoryl diester phosphodiesterase
- glycerophosphodiester phosphodiesterase, putative
- Glycerophosphoryl diester phosphodiesterase, periplasmic
- glycerophosphodiester phosphodiesterase
- glycerophosphoryl diester phosphodiesterase family protein
- Membrane domain of membrane-anchored glycerophosphoryl diester phosphodiesterase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1360382..1362196
- synteny block?: BlockID0006080
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0228
08BA02176:
C248_0212
11819-97:
MS7_0214
6850:
RSAU_000172
71193:
ST398NM01_0238
ECT-R 2:
ECTR2_188
ED133:
SAOV_0165
ED98:
SAAV_0193
HO 5096 0412:
SAEMRSA15_01860
JH1:
SaurJH1_0218
JH9:
SaurJH9_0212
JKD6008:
SAA6008_00197 (glpQ1)
JKD6159:
SAA6159_00202 (glpQ1)
LGA251:
SARLGA251_01920
M013:
M013TW_0207
MRSA252:
SAR0220
MSHR1132:
SAMSHR1132_01930
MSSA476:
SAS0204
Mu3:
SAHV_0227
Mu50:
SAV0228
MW2:
MW0204
RF122:
SAB0167
ST398:
SAPIG0238
T0131:
SAT0131_00215
TCH60:
HMPREF0772_10277 (glpQ)
TW20:
SATW20_02290
USA300_TCH1516:
USA300HOU_0236 (glpQ1)
VC40:
SAVC_00880
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL -----------------MKRISKDIWAVFKLLYQNKGRFSINALLLQLIMIFISSTYLIL
N315 -----------------MKRISKDIWAVFKLLYQNKGRFSINALLLQLIMIFISSTYLIL
NCTC8325 -----------------MKRISKDIWAVFKLLYQNKGRFSINALLLQLIMIFISSTYLIL
Newman MKNIKMKLNIKAMRSVIMKRISKDIWAVFKLLYQNKGRFSINALLLQLIMIFISSTYLIL
USA300_FPR3757 -----------------MKRISKDIWAVFKLLYQNKGRFSINALLLQLIMIFISSTYLIL
*******************************************
COL LFNMMLKVAGQSQLTINNWTEIVSHPASVILLIIFILSVAFLIYVEFSLLVYMVYAGFDR
N315 LFNMMLKVAGQSQLTINNWMEIISHPASVILLIIFILSVAFLIYVEFSLLVYMVYAGFDR
NCTC8325 LFNMMLKVAGQSQLTINNWTEIVSHPASVILLIIFILSVAFLIYVEFSLLVYMVYAGFDR
Newman LFNMMLKVAGQSQLTINNWTEIVSHPASVILLIIFILSVAFLIYVEFSLLVYMVYAGFDR
USA300_FPR3757 LFNMMLKVAGQSQLTINNWTEIVSHPASVILLIIFILSVAFLIYVEFSLLVYMVYAGFDR
******************* **:*************************************
COL QIITFKSIFKNAFVNVRKLIGVPVIFFVIYLMLMIPIANLGLSSVLTKNIYIPKFLTEEL
N315 QIITFKSIFKNAFVNVRKLIGVPVIFFVIYLMLMIPIANLGLSSVLTKNIYIPKFLTEEL
NCTC8325 QIITFKSIFKNAFVNVRKLIGVPVIFFVIYLMLMIPIANLGLSSVLTKNIYIPKFLTEEL
Newman QIITFKSIFKNAFVNVRKLIGVPVIFFVIYLMLMIPIANLGLSSVLTKNIYIPKFLTEEL
USA300_FPR3757 QIITFKSIFKNAFVNVRKLIGVPVIFFVIYLMLMIPIANLGLSSVLTKNIYIPKFLTEEL
************************************************************
COL MKTTKGIIIYGTFMIAVFILNFKLIFTLPLTILNRQSLFKNMRLSWQITKRNKFRLVIEI
N315 MKTTKGIIIYGTFMIAVFILNFKLIFTLPLTILNRQSLFKNMRLSWQITKRNKFRLVIEI
NCTC8325 MKTTKGIIIYGTFMIAVFILNFKLIFTLPLTILNRQSLFKNMRLSWQITKRNKFRLVIEI
Newman MKTTKGIIIYGTFMIAVFILNFKLIFTLPLTILNRQSLFKNMRLSWQITKRNKFRLVIEI
USA300_FPR3757 MKTTKGIIIYGTFMIAVFILNFKLIFTLPLTILNRQSLFKNMRLSWQITKRNKFRLVIEI
************************************************************
COL VILELIIGAILTLIISGATYLAICVDEEGDKFLVSSILFVVLKSALFFYYLFTKLSLISV
N315 VILELIIGAILTLIISGATYLAICVDEEGDKFLVSSILFVVLKSALFFYYLFTKLSLISV
NCTC8325 VILELIIGAILTLIISGATYLAICVDEEGDKFLVSSILFVVLKSALFFYYLFTKLSLISV
Newman VILELIIGAILTLIISGATYLAICVDEEGDKFLVSSILFVVLKSALFFYYLFTKLSLISV
USA300_FPR3757 VILELIIGAILTLIISGATYLAICVDEEGDKFLVSSILFVVLKSALFFYYLFTKLSLISV
************************************************************
COL LVLHLKQENVLDQPGLEFKYPKPKRKSRFFIISMVLAVTCFIGYNMYLLYNNTINTNISI
N315 LVLHLKQENVLDQPGLEFKYPKSKRKSRFFIISMVLAVTCFIGYNMYLLYNNTINTNISI
NCTC8325 LVLHLKQENVLDQPGLEFKYPKPKRKSRFFIISMVLAVTCFIGYNMYLLYNNTINTNISI
Newman LVLHLKQENVLDQPGLEFKYPKPKRKSRFFIISMVLAVTCFIGYNMYLLYNNTINTNISI
USA300_FPR3757 LVLHLKQENVLDQPGLEFKYPKPKRKSRFFIISMVLAVTCFIGYNMYLLYNNTINTNISI
**********************.*************************************
COL IGHRGFEDKGVENSIPSLKAAAKANVEYVELDTIMTKDKQFVVSHDNNLKRLTGVNKNIS
N315 IGHRGFEDKGVENSIPSLKAAAKANVEYVELDTIMTKDKQFVVSHDNNLKRLTGVNKNIS
NCTC8325 IGHRGFEDKGVENSIPSLKAAAKANVEYVELDTIMTKDKQFVVSHDNNLKRLTGVNKNIS
Newman IGHRGFEDKGVENSIPSLKAAAKANVEYVELDTIMTKDKQFVVSHDNNLKRLTGVNKNIS
USA300_FPR3757 IGHRGFEDKGVENSIPSLKAAAKANVEYVELDTIMTKDKQFVVSHDNNLKRLTGVNKNIS
************************************************************
COL ESNFKDIVGLKMRQNGHEAKFVSLDEFIETAKQSNVKLLVELKPHGKEPADYTQRVIDIL
N315 ESNFKDVVGLKMRQNGHEAKLVSLDEFIETAKQSNVKLLVELKPHGKEPADYTQRVIDIL
NCTC8325 ESNFKDIVGLKMRQNGHEAKFVSLDEFIETAKQSNVKLLVELKPHGKEPADYTQRVIDIL
Newman ESNFKDIVGLKMRQNGHEAKFVSLDEFIETAKQSNVKLLVELKPHGKEPADYTQRVIDIL
USA300_FPR3757 ESNFKDIVGLKMRQNGHEAKFVSLDEFIETAKQSNVKLLVELKPHGKEPADYTQRVIDIL
******:*************:***************************************
COL KKHGVEHQYRVMSLDYDVMTKLKKEAPYLKCGYIIPLQFGHFKETSLDFFVIEDFSYSPR
N315 KKHGVEHQYRVMSLDYDVMTKLKKEAPYLKCGYIIPLQFGHFKETSLDFFVIEDFSYSPR
NCTC8325 KKHGVEHQYRVMSLDYDVMTKLKKEAPYLKCGYIIPLQFGHFKETSLDFFVIEDFSYSPR
Newman KKHGVEHQYRVMSLDYDVMTKLKKEAPYLKCGYIIPLQFGHFKETSLDFFVIEDFSYSPR
USA300_FPR3757 KKHGVEHQYRVMSLDYDVMTKLKKEAPYLKCGYIIPLQFGHFKETSLDFFVIEDFSYSPR
************************************************************
COL LVNQAHLENKEVYTWTINGEEDLTKYLQTNVDGIITDDPALADQIKEEKKDETYFDRSIR
N315 LVNQAHLENKEVYTWTINGEEDLTKYLQTNVDGIITDDPALADQIKEEKKDETYFDRSIR
NCTC8325 LVNQAHLENKEVYTWTINGEEDLTKYLQTNVDGIITDDPALADQIKEEKKDETYFDRSIR
Newman LVNQAHLENKEVYTWTINGEEDLTKYLQTNVDGIITDDPALADQIKEEKKDETYFDRSIR
USA300_FPR3757 LVNQAHLENKEVYTWTINGEEDLTKYLQTNVDGIITDDPALADQIKEEKKDETYFDRSIR
************************************************************
COL ILFE
N315 ILFE
NCTC8325 ILFE
Newman ILFE
USA300_FPR3757 ILFE
****