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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001088000
- symbol?: coa
- synonym:
- description?: coagulase
- coagulase
- staphylocoagulase
- staphylocoagulase precursor
- coagulase family-protein
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1362944..1365779
- synteny block?: BlockID0006100
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0230 (coa)
08BA02176:
C248_0214 (coa)
11819-97:
MS7_0216 (coa)
6850:
RSAU_000175 (coa)
71193:
ST398NM01_0240
ECT-R 2:
ECTR2_190
ED133:
SAOV_0167 (coa)
ED98:
SAAV_0195
HO 5096 0412:
SAEMRSA15_01880
JH1:
SaurJH1_0220
JH9:
SaurJH9_0214
JKD6008:
SAA6008_00199
JKD6159:
SAA6159_00204 (coa)
LGA251:
SARLGA251_01940 (coa)
M013:
M013TW_0209
MRSA252:
SAR0222
MSHR1132:
—
MSSA476:
SAS0206
Mu3:
SAHV_0229 (coa)
Mu50:
SAV0230 (coa)
MW2:
MW0206 (coa)
RF122:
SAB0169
ST398:
SAPIG0240
T0131:
SAT0131_00217
TCH60:
HMPREF0772_10275 (coa)
TW20:
SATW20_02310 (coa)
USA300_TCH1516:
USA300HOU_0238
VC40:
SAVC_00890
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKKQIISLGALAVASSLFTWDNKADAIVTKDYSGKSQVNAGSKNGTLIDSRYLNSALYYL
N315 MKKQIISLGALAVASSLFTWDNKADAIVTKDYSKESRVNEKSKKGATVSDYYYWKIIDSL
NCTC8325 MKKQIISLGALAVASSLFTWDNKADAIVTKDYSGKSQVNAGSKNGTLIDSRYLNSALYYL
Newman MKKQIISLGALAVASSLFTWDNKADAIVTKDYSGKSQVNAGSKNGTLIDSRYLNSALYYL
USA300_FPR3757 MKKQIISLGALAVASSLFTWDNKADAIVTKDYSGKSQVNAGSKNGTLIDSRYLNSALYYL
********************************* :*:** **:*: :.. * . : *
COL EDYIIYAIGLTNKYEYGDNIYKEAKDRLLEKVLREDQYLLERKKSQYEDYKQWYANYKKE
N315 EAQFTGAIDLLEDYKYGDPIYKEAKDRLMTRVLGEDQYLLKKKIDEYELYKKWYKSSNK-
NCTC8325 EDYIIYAIGLTNKYEYGDNIYKEAKDRLLEKVLREDQYLLERKKSQYEDYKQWYANYKKE
Newman EDYIIYAIGLTNKYEYGDNIYKEAKDRLLEKVLREDQYLLERKKSQYEDYKQWYANYKKE
USA300_FPR3757 EDYIIYAIGLTNKYEYGDNIYKEAKDRLLEKVLREDQYLLERKKSQYEDYKQWYANYKKE
* : **.* :.*:*** *********: :** ******::* .:** **:** . :*
COL NPRTDLKMANFHKYNLEELSMKEYNELQDALKRALDDFHREVKDIKDKNSDLKTFNAAEE
N315 ----NTNMLTFHKYNLYNLTMNEYNDIFNSLKDAVYQFNKEVKEIEHKNVDLKQFDKDGE
NCTC8325 NPRTDLKMANFHKYNLEELSMKEYNELQDALKRALDDFHREVKDIKDKNSDLKTFNAAEE
Newman NPRTDLKMANFHKYNLEELSMKEYNELQDALKRALDDFHREVKDIKDKNSDLKTFNAAEE
USA300_FPR3757 NPRTDLKMANFHKYNLEELSMKEYNELQDALKRALDDFHREVKDIKDKNSDLKTFNAAEE
: :* .****** :*:*:***:: ::** *: :*::***:*:.** *** *: *
COL DKATKEVYDLVSEIDTLVVSYYGDKDYGEHAKELRAKLDLILGDTDNPHKITNERIKKEM
N315 DKATKEVYDLVSEIDTLVVTYYADKDYGEHAKELRAKLDLILGDTDNPHKITNERIKKEM
NCTC8325 DKATKEVYDLVSEIDTLVVSYYGDKDYGEHAKELRAKLDLILGDTDNPHKITNERIKKEM
Newman DKATKEVYDLVSEIDTLVVSYYGDKDYGEHAKELRAKLDLILGDTDNPHKITNERIKKEM
USA300_FPR3757 DKATKEVYDLVSEIDTLVVSYYGDKDYGEHAKELRAKLDLILGDTDNPHKITNERIKKEM
*******************:**.*************************************
COL IDDLNSIIDDFFMETKQNRPKSITKYNPTTHNYKTNSDNKPNFDKLVEETKKAVKEADDS
N315 IDDLNSIIDDFFMETKQNRPNSITKYDPTKHNFKEKSENKPNFDKLVEETKKAVKEADES
NCTC8325 IDDLNSIIDDFFMETKQNRPKSITKYNPTTHNYKTNSDNKPNFDKLVEETKKAVKEADDS
Newman IDDLNSIIDDFFMETKQNRPKSITKYNPTTHNYKTNSDNKPNFDKLVEETKKAVKEADDS
USA300_FPR3757 IDDLNSIIDDFFMETKQNRPKSITKYNPTTHNYKTNSDNKPNFDKLVEETKKAVKEADDS
********************:*****:**.**:* :*:********************:*
COL WKKKTVKKYGETETKSPVVKEEKKVEEPQAPKVDNQQEVKTTAGKAEETTQPVAQPLVKI
N315 WKNKTVKKYEETVTKSPVVKEEKKVEEPQLPKVGNQQEVKTTAGKAEETTQPVAQPLVKI
NCTC8325 WKKKTVKKYGETETKSPVVKEEKKVEEPQAPKVDNQQEVKTTAGKAEETTQPVAQPLVKI
Newman WKKKTVKKYGETETKSPVVKEEKKVEEPQAPKVDNQQEVKTTAGKAEETTQPVAQPLVKI
USA300_FPR3757 WKKKTVKKYGETETKSPVVKEEKKVEEPQAPKVDNQQEVKTTAGKAEETTQPVAQPLVKI
**:****** ** **************** ***.**************************
COL PQGTITGEIVKGPEYPTMENKTVQGEIVQGPDFLTMEQSGPSLSNNYTNPPLTNPILEGL
N315 PQETIYGETVKGPEYPTMENKTLQGEIVQGPDFLTMEQNRPSLSDNYTQPTTPNPILEGL
NCTC8325 PQGTITGEIVKGPEYPTMENKTVQGEIVQGPDFLTMEQSGPSLSNNYTNPPLTNPILEGL
Newman PQGTITGEIVKGPEYPTMENKTVQGEIVQGPDFLTMEQSGPSLSNNYTNPPLTNPILEGL
USA300_FPR3757 PQGTITGEIVKGPEYPTMENKTVQGEIVQGPDFLTMEQSGPSLSNNYTNPPLTNPILEGL
** ** ** *************:***************. ****:***:*. .*******
COL EGSSSKLEIKPQGTESTLKGTQGESSDIEVKPQATETTEASQYGPRPQFNKTPKYVKYRD
N315 EGSSSKLEIKPQGTESTLKGIQGESSDIEVKPQATETTEASQYGPRPQFNKTPKYVKYRD
NCTC8325 EGSSSKLEIKPQGTESTLKGTQGESSDIEVKPQATETTEASQYGPRPQFNKTPKYVKYRD
Newman EGSSSKLEIKPQGTESTLKGTQGESSDIEVKPQATETTEASQYGPRPQFNKTPKYVKYRD
USA300_FPR3757 EGSSSKLEIKPQGTESTLKGTQGESSDIEVKPQATETTEASQYGPRPQFNKTPKYVKYRD
******************** ***************************************
COL AGTGIREYNDGTFGYEARPRF---------------------------NKPSETNAYNVT
N315 AGTGIREYNDGTFGYEARPRFNKPSETNAYNVTTNQDGTVSYGARPTQNKPSETNAYNVT
NCTC8325 AGTGIREYNDGTFGYEARPRF---------------------------NKPSETNAYNVT
Newman AGTGIREYNDGTFGYEARPRF---------------------------NKPSETNAYNVT
USA300_FPR3757 AGTGIREYNDGTFGYEARPRF---------------------------N-----------
********************* *
COL THANGQVSYGARPTYKKPSETNAYNVTTHANGQVSYGARPTQNKPSKTNAYNVTTHGNGQ
N315 THANGQVSYGARPTQKKPSKTNAYNVTTHANGQVSYGARPTQKKPSKTNAYNVTTHANGQ
NCTC8325 THANGQVSYGARPTYKKPSETNAYNVTTHANGQVSYGARPTQNKPSKTNAYNVTTHGNGQ
Newman THANGQVSYGARPTYKKPSETNAYNVTTHANGQVSYGARPTQNKPSKTNAYNVTTHGNGQ
USA300_FPR3757 ----------------KPSETNAYNVTTHANGQVSYGARPTQNKPSKTNAYNVTTHGNGQ
***:**********************:*************.***
COL VSYGARPTQNKPSKTNAYNVTTHANGQVSYGARPTYKKPSKTNAYNVTTHADGTATYGPR
N315 VSYGARPTYKKPSETNAYNVTTHANGQVSYGARPTQKKPSETNAYNVTTHADGTATYGPR
NCTC8325 VSYGARPTQNKPSKTNAYNVTTHANGQVSYGARPTYKKPSKTNAYNVTTHADGTATYGPR
Newman VSYGARPTQNKPSKTNAYNVTTHANGQVSYGARPTYKKPSKTNAYNVTTHADGTATYGPR
USA300_FPR3757 VSYGARPTQNKPSKTNAYNVTTHANGQVSYGARPTYKKPSKTNAYNVTTHADGTATYGPR
******** :***:********************* ****:*******************
COL VTK
N315 VTK
NCTC8325 VTK
Newman VTK
USA300_FPR3757 VTK
***