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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001110000
- symbol?: glcC
- synonym:
- description?: PTS glucose transporter subunit IIB
- PTS glucose transporter subunit IIB
- PTS system, IIBC components
- glucose-specific PTS transport system, IIBC component, putative
- PTS system glucose-specific transporter subunit IIBC
- PTS family glucose/glucoside (glc) porter component IIABC
- phosphotransferase system enzyme II
- pseudogene
- PTS enzyme
- PTS system, glucose-like IIB component domain protein
- PTS system, glucose-like IIB subunint
- PTS system, maltose and glucose-specific IIC component / PTS system, maltose and glucose-specific IIB component
- PTS system glucose-like transporter subunit IIB
- pts system glucose-specific eiicba component (eiicba-glc) (eii-glc/eiii-glc)
- PTS system maltose/glucose-specific IICB component
- PTS system maltose-and glucose-specific EIICB component
- PTS system transporter subunit IIBC
- PTS transport system, IIBC component
- putative PTS transport system, IIBC component
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 1386114..1387564
- synteny block?: BlockID0006300
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0242
08BA02176:
C248_0228
11819-97:
MS7_0229
6850:
RSAU_000187
71193:
ST398NM01_0254
ECT-R 2:
ECTR2_203
ED133:
SAOV_0180
ED98:
SAAV_0208
HO 5096 0412:
SAEMRSA15_02010
JH1:
SaurJH1_0233
JH9:
SaurJH9_0227
JKD6008:
SAA6008_00214
JKD6159:
SAA6159_00219
LGA251:
SARLGA251_02060
M013:
M013TW_0222
MRSA252:
SAR0235
MSHR1132:
SAMSHR1132_02100
MSSA476:
SAS0218
Mu3:
SAHV_0241
Mu50:
SAV0242
MW2:
MW0218
RF122:
SAB0181c
ST398:
SAPIG0254
T0131:
SAT0131_00233
TCH60:
HMPREF0772_10261 (ptsG)
TW20:
SATW20_02440
USA300_TCH1516:
USA300HOU_0252
VC40:
SAVC_00950
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL --MKSLFEKAQQFGKSFMLPIAILPAAGLLLGIGGALSNPNTVKAYPILDITLLQNIFTL
N315 --MKSLFEKAQQFGKSFMLPIAILPAAGLLLGIGGALSNPNTVKAYPILDITLLQNIFTL
NCTC8325 --MKSLFEKAQQFGKSFMLPIAILPAAGLLLGIGGALSNPNTVKAYPILDITLLQNIFTL
Newman MLMKSLFEKAQQFGKSFMLPIAILPAAGLLLGIGGALSNPNTVKAYPILDITLLQNIFTL
USA300_FPR3757 --MKSLFEKAQQFGKSFMLPIAILPAAGLLLGIGGALSNPNTVKAYPILDITLLQNIFTL
**********************************************************
COL MSAAGSIVFQNLPVIFAIGVAIGLSRSDKGTAGLAALLGFLIMNATMNGLLTITGTLAKD
N315 MSAAGSIVFQNLPVIFAIGVAIGLSRSDKGTAGLAALLGFLIMNATMNGLLTITGTLAKD
NCTC8325 MSAAGSIVFQNLPVIFAIGVAIGLSRSDKGTAGLAALLGFLIMNATMNGLLTITGTLAKD
Newman MSAAGSIVFQNLPVIFAIGVAIGLSRSDKGTAGLAALLGFLIMNATMNGLLTITGTLAKD
USA300_FPR3757 MSAAGSIVFQNLPVIFAIGVAIGLSRSDKGTAGLAALLGFLIMNATMNGLLTITGTLAKD
************************************************************
COL QLAQNGQGMVLGIQTVETGVFGGIITGIMTAILHNKYHKVVLPPYLGFFGGSRFVPIVTA
N315 QLAQNGQGMVLGIQTVETGVFGGIITGIMTAILHNKYHKVVLPPYLGFFGGSRFVPIVTA
NCTC8325 QLAQNGQGMVLGIQTVETGVFGGIITGIMTAILHNKYHKVVLPPYLGFFGGSRFVPIVTA
Newman QLAQNGQGMVLGIQTVETGVFGGIITGIMTAILHNKYHKVVLPPYLGFFGGSRFVPIVTA
USA300_FPR3757 QLAQNGQGMVLGIQTVETGVFGGIITGIMTAILHNKYHKVVLPPYLGFFGGSRFVPIVTA
************************************************************
COL FAAIFLGVLMFFIWPSIQAGIYHVGGFVTKTGAIGTFVYGFILRLLGPLGLHHIFYLPFW
N315 FAAIFLGVLMFFIWPSIQAGIYHVGGFVTKTGAIGTFVYGFILRLLGPLGLHHIFYLPFW
NCTC8325 FAAIFLGVLMFFIWPSIQAGIYHVGGFVTKTGAIGTFVYGFILRLLGPLGLHHIFYLPFW
Newman FAAIFLGVLMFFIWPSIQAGIYHVGGFVTKTGAIGTFVYGFILRLLGPLGLHHIFYLPFW
USA300_FPR3757 FAAIFLGVLMFFIWPSIQAGIYHVGGFVTKTGAIGTFVYGFILRLLGPLGLHHIFYLPFW
************************************************************
COL QTALGGTLEVKGHLVQGTQNIFFAQLGDPDVTKYYSGVSRFMSGRFITMMFGLCGAALAI
N315 QTALGGTLEVKGHLVQGTQNIFFAQLGDPDVTKYYSGVSRFMSGRFITMMFGLCGAALAI
NCTC8325 QTALGGTLEVKGHLVQGTQNIFFAQLGDPDVTKYYSGVSRFMSGRFITMMFGLCGAALAI
Newman QTALGGTLEVKGHLVQGTQNIFFAQLGDPDVTKYYSGVSRFMSGRFITMMFGLCGAALAI
USA300_FPR3757 QTALGGTLEVKGHLVQGTQNIFFAQLGDPDVTKYYSGVSRFMSGRFITMMFGLCGAALAI
************************************************************
COL YHTAKPEHKKVVGGLMLSAALTSFLTGITEPLEFSFLFVAPILYVIHAFFDGLAFMMADI
N315 YHTAKPEHKKVVGGLMLSAALTSFLTGITEPLEFSFLFVAPILYVIHAFFDGLAFMMADI
NCTC8325 YHTAKPEHKKVVGGLMLSAALTSFLTGITEPLEFSFLFVAPILYVIHAFFDGLAFMMADI
Newman YHTAKPEHKKVVGGLMLSAALTSFLTGITEPLEFSFLFVAPILYVIHAFFDGLAFMMADI
USA300_FPR3757 YHTAKPEHKKVVGGLMLSAALTSFLTGITEPLEFSFLFVAPILYVIHAFFDGLAFMMADI
************************************************************
COL FNITIGQTFSGGFIDFLLFGVLQGNSKTNYLYVIPIGIVWFCLYYIVFRFLITKFNFKTP
N315 FNITIGQTFSGGFIDFLLFGVLQGNSKTNYLYVIPIGIVWFCLYYIVFRFLITKFNFKTP
NCTC8325 FNITIGQTFSGGFIDFLLFGVLQGNSKTNYLYVIPIGIVWFCLYYIVFRFLITKFNFKTP
Newman FNITIGQTFSGGFIDFLLFGVLQGNSKTNYLYVIPIGIVWFCLYYIVFRFLITKFNFKTP
USA300_FPR3757 FNITIGQTFSGGFIDFLLFGVLQGNSKTNYLYVIPIGIVWFCLYYIVFRFLITKFNFKTP
************************************************************
COL GREDKAAAQQVEATERAQTIVAGLGGKDNIEIVDCCATRLRVTLHQNDKVDKVLLESTGA
N315 GREDKAAAQQVEATERAQTIVAGLGGKDNIEIVDCCATRLRVTLNQNDKVDKVLLESTGA
NCTC8325 GREDKAAAQQVEATERAQTIVAGLGGKDNIEIVDCCATRLRVTLHQNDKVDKVLLESTGA
Newman GREDKAAAQQVEATERAQTIVAGLGGKDNIEIVDCCATRLRVTLHQNDKVDKVLLESTGA
USA300_FPR3757 GREDKAAAQQVEATERAQTIVAGLGGKDNIEIVDCCATRLRVTLHQNDKVDKVLLESTGA
********************************************:***************
COL KGVIQQGTGVQVIYGPHVTVIKNEIEELLGD
N315 KGVIQQGTGVQVIYGPHVTVIKNEIEELLGD
NCTC8325 KGVIQQGTGVQVIYGPHVTVIKNEIEELLGD
Newman KGVIQQGTGVQVIYGPHVTVIKNEIEELLGD
USA300_FPR3757 KGVIQQGTGVQVIYGPHVTVIKNEIEELLGD
*******************************